RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TESMINQ9Y4I5 508 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 NINQ8N4C6 2090 aa7.02□□□□□ -1.29
VPS50-204ENST00000438395 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 A0A1B0GTL3 188 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 A8MXE2 369 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 H3BML4 177 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 C16orf97H3BN30 126 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 TSPAN2O60636 221 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 KCNH1O95259 989 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 JUNP05412 331 aaKnown RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 ABHD2P08910 425 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CT45A8P0DMV1 189 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CT45A9P0DMV2 189 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 MYL2P10916 166 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 POU2F1P14859 743 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CHN1P15882 459 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CD53P19397 219 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 DDCP20711 480 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 IMPDH1P20839 514 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 FPR1P21462 350 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 ME2P23368 584 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CD79BP40259 229 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 PTGDSP41222 190 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 HTR6P50406 440 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CTBP2P56545 445 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 CLDN18P56856 261 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 DUSP2Q05923 314 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 LTBQ06643 244 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 C2orf80Q0P641 193 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 EXOC3L2Q2M3D2 409 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 GLE1Q53GS7 698 aaKnown RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 CT45A2Q5DJT8 189 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 ZNF678Q5SXM1 525 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 UBAP2Q5T6F2 1119 aaKnown RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 GALNT18Q6P9A2 607 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 TMEM107Q6UX40 140 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 PLXDC2Q6UX71 529 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 NPSR1Q6W5P4 371 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 TRMT10CQ7L0Y3 403 aaKnown RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 ADGRE4PQ86SQ3 457 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 OR7G2Q8NG99 324 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 PIK3IP1Q96FE7 263 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 PGM2Q96G03 612 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 DSN1Q9H410 356 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 GSX1Q9H4S2 264 aaPredicted RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 EQTNQ9NQ60 294 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 RRAGDQ9NQL2 400 aaPredicted RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 DLL4Q9NR61 685 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 C6orf203Q9P0P8 240 aaPredicted RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 GRID1Q9ULK0 1009 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 PROCRQ9UNN8 238 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 EMC9Q9Y3B6 208 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 MRPS18CQ9Y3D5 142 aaKnown RBP7.01□□□□□ -1.29
VPS50-204ENST00000438395 ZNF175Q9Y473 711 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 MED12Q93074 2177 aa7.01□□□□□ -1.29
VPS50-204ENST00000438395 A0A087WV62 115 aa7□□□□□ -1.29
VPS50-204ENST00000438395 TNFSF12-TNFSF13A0A0A6YY99 330 aa7□□□□□ -1.29
VPS50-204ENST00000438395 TTC36A6NLP5 189 aa7□□□□□ -1.29
VPS50-204ENST00000438395 H3BQF6 201 aa7□□□□□ -1.29
VPS50-204ENST00000438395 GOLGA8RI6L899 631 aa7□□□□□ -1.29
VPS50-204ENST00000438395 CTIFO43310 598 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 EMC8O43402 210 aa7□□□□□ -1.29
VPS50-204ENST00000438395 HCRTR2O43614 444 aa7□□□□□ -1.29
VPS50-204ENST00000438395 GMFGO60234 142 aa7□□□□□ -1.29
VPS50-204ENST00000438395 DLX3O60479 287 aa7□□□□□ -1.29
VPS50-204ENST00000438395 NME6O75414 186 aaPredicted RBP7□□□□□ -1.29
VPS50-204ENST00000438395 TNFRSF21O75509 655 aa7□□□□□ -1.29
VPS50-204ENST00000438395 TNFSF13O75888 250 aa7□□□□□ -1.29
VPS50-204ENST00000438395 SYNGR4O95473 234 aa7□□□□□ -1.29
VPS50-204ENST00000438395 TGM6O95932 706 aa7□□□□□ -1.29
VPS50-204ENST00000438395 HPGDP15428 266 aa7□□□□□ -1.29
VPS50-204ENST00000438395 DDX5P17844 614 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 EPHA1P21709 976 aa7□□□□□ -1.29
VPS50-204ENST00000438395 HOXC12P31275 282 aa7□□□□□ -1.29
VPS50-204ENST00000438395 UGT2B10P36537 528 aa7□□□□□ -1.29
VPS50-204ENST00000438395 EIF1AXP47813 144 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 PRKAA2P54646 552 aa7□□□□□ -1.29
VPS50-204ENST00000438395 NAA20P61599 178 aa7□□□□□ -1.29
VPS50-204ENST00000438395 FAM27E3Q08E93 113 aa7□□□□□ -1.29
VPS50-204ENST00000438395 PON3Q15166 354 aa7□□□□□ -1.29
VPS50-204ENST00000438395 UNC50Q53HI1 259 aa7□□□□□ -1.29
VPS50-204ENST00000438395 VWA1Q6PCB0 445 aa7□□□□□ -1.29
VPS50-204ENST00000438395 IKBIPQ70UQ0 350 aa7□□□□□ -1.29
VPS50-204ENST00000438395 Q71RC1 249 aaPredicted RBP7□□□□□ -1.29
VPS50-204ENST00000438395 STK32CQ86UX6 486 aa7□□□□□ -1.29
VPS50-204ENST00000438395 IFT20Q8IY31 132 aa7□□□□□ -1.29
VPS50-204ENST00000438395 CCDC63Q8NA47 563 aa7□□□□□ -1.29
VPS50-204ENST00000438395 NOA1Q8NC60 698 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 OR2M3Q8NG83 312 aa7□□□□□ -1.29
VPS50-204ENST00000438395 ZFP28Q8NHY6 868 aa7□□□□□ -1.29
VPS50-204ENST00000438395 FNDC9Q8TBE3 224 aa7□□□□□ -1.29
VPS50-204ENST00000438395 GPR151Q8TDV0 419 aa7□□□□□ -1.29
VPS50-204ENST00000438395 ACMSDQ8TDX5 336 aa7□□□□□ -1.29
VPS50-204ENST00000438395 FIG4Q92562 907 aa7□□□□□ -1.29
VPS50-204ENST00000438395 CAVIN3Q969G5 261 aa7□□□□□ -1.29
VPS50-204ENST00000438395 L3HYPDHQ96EM0 354 aa7□□□□□ -1.29
VPS50-204ENST00000438395 APIPQ96GX9 242 aa7□□□□□ -1.29
VPS50-204ENST00000438395 ZC3HAV1LQ96H79 300 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 G6PC3Q9BUM1 346 aa7□□□□□ -1.29
VPS50-204ENST00000438395 KLHL4Q9C0H6 718 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms