RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OR2J2O76002 312 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 FCGR1AP12314 374 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 NID1P14543 1247 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 MAGEA2P43356 314 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 SRSF6Q13247 344 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 GLIPR1L2Q4G1C9 344 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 H3F3CQ6NXT2 135 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF836Q6ZNA1 936 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 SLC5A8Q8N695 610 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF248Q8NDW4 579 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 KCNE4Q8WWG9 221 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 THAP4Q8WY91 577 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 HS6ST1O60243 411 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 TIPRLO75663 272 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 BAG2O95816 211 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 LGI1O95970 557 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 FABP3P05413 133 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 CYP4B1P13584 511 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 TMED10P49755 219 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 EEF1A1P68104 462 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 KCNC4Q03721 635 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 CRTC2Q53ET0 693 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 EIPR1Q53HC9 387 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 PDZK1Q5T2W1 519 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 RNF220Q5VTB9 566 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 JMJD6Q6NYC1 403 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 RPS19BP1Q86WX3 136 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ZDHHC21Q8IVQ6 265 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 APOBEC4Q8WW27 367 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 RASL10BQ96S79 203 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ATP13A2Q9NQ11 1180 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 NKX1-2Q9UD57 310 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 SLC13A4Q9UKG4 626 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 YARS2Q9Y2Z4 477 aaKnown RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ITGA10O75578 1167 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 UTS2O95399 124 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 EPPINO95925 133 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 TBXA2RP21731 343 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 AIMP2Q13155 320 aaKnown RBP21.17■□□□□ 0.98
CPSF4-204ENST00000436336 EFR3AQ14156 821 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 GRAMD1BQ3KR37 738 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 ERMP1Q7Z2K6 904 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 PIWIL3Q7Z3Z3 882 aaKnown RBP21.17■□□□□ 0.98
CPSF4-204ENST00000436336 PQLC1Q8N2U9 271 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF527Q8NB42 609 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 OR4C3Q8NH37 302 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 NAF1Q96HR8 494 aaKnown RBP21.17■□□□□ 0.98
CPSF4-204ENST00000436336 C7orf34Q96L11 122 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 CDCP1Q9H5V8 836 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 ARMC7Q9H6L4 198 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.17■□□□□ 0.98
CPSF4-204ENST00000436336 KLHL28Q9NXS3 571 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 CHST2Q9Y4C5 530 aa21.17■□□□□ 0.98
CPSF4-204ENST00000436336 CPAMD8Q8IZJ3 1885 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 UGT2B11O75310 529 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 MT-ND1P03886 318 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 TNFRSF1BP20333 461 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 FASP25445 335 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 OR1E2P47887 323 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 MLF1P58340 268 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 VLDLRP98155 873 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 FGFBP1Q14512 234 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 ZSWIM7Q19AV6 140 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 LYPD8Q6UX82 237 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF614Q8N883 585 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 SNIP1Q8TAD8 396 aaKnown RBP21.16■□□□□ 0.98
CPSF4-204ENST00000436336 DPH1Q9BZG8 443 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 RASSF4Q9H2L5 321 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 ZBTB20Q9HC78 741 aaPredicted RBP21.16■□□□□ 0.98
CPSF4-204ENST00000436336 C6orf203Q9P0P8 240 aaPredicted RBP21.16■□□□□ 0.98
CPSF4-204ENST00000436336 SLC9A8Q9Y2E8 581 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 DTNAQ9Y4J8 743 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 SPTBN2O15020 2390 aa21.16■□□□□ 0.98
CPSF4-204ENST00000436336 TLX3O43711 291 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 ICOSLGO75144 302 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 OXSR1O95747 527 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 IFNW1P05000 195 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 NGFRP08138 427 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 HPGDP15428 266 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 MRPL2Q5T653 305 aaKnown RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 ATP1A1-AS1Q5TC04 95 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 COMTD1Q86VU5 262 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CARM1Q86X55 608 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 LILRA2Q8N149 483 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CLIP4Q8N3C7 705 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 TMEM102Q8N9M5 508 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CLEC1AQ8NC01 280 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 LRTOMTQ8WZ04 291 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 THOC3Q96J01 351 aaKnown RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 ARHGDIGQ99819 225 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 PKP2Q99959 881 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 FLRT3Q9NZU0 649 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 SPTBN4Q9H254 2564 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CDHR4A6H8M9 788 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 PRAMEF25A6NGN4 478 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 CLDN24A6NM45 220 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF891A8MT65 544 aaPredicted RBP21.15■□□□□ 0.98
CPSF4-204ENST00000436336 hCG_2039718K7EN88 272 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 SCDO00767 359 aa21.15■□□□□ 0.98
CPSF4-204ENST00000436336 NKX2-8O15522 239 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms