RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF19P17023 458 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 GPR143P51810 404 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 DCST2Q5T1A1 773 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 YIPF7Q8N8F6 280 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 OR8K3Q8NH51 312 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 MZB1Q8WU39 189 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 UFD1Q92890 307 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 IGHV1OR21-1A0A087WYE8 117 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 NPIPA2E9PIF3 369 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 NPIPA3F8WFD2 350 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 DSG2Q14126 1118 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 C18orf63Q68DL7 685 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 RFKQ969G6 155 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 MS4A6EQ96DS6 147 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 PCDHB14Q9Y5E9 798 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 PAPLNO95428 1278 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 ITGA5P08648 1049 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
PTCH1-207ENST00000429896 TMEM225Q6GV28 225 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 PYHIN1Q6K0P9 492 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF676Q8N7Q3 588 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 DDIT4LQ96D03 193 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 COQ10BQ9H8M1 238 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 SLAMF7Q9NQ25 335 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 SEC14L5O43304 696 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 RNF13O43567 381 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 OR6N1Q8NGY5 312 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 OR8S1Q8NH09 359 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 ABHD5Q8WTS1 349 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 CDS1Q92903 461 aa12.11□□□□□ -0.47
PTCH1-207ENST00000429896 SOX14O95416 240 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 NSA2O95478 260 aaKnown RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HMGN2P05204 90 aaKnown RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 TNFAIP8L3Q5GJ75 292 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 TRIM46Q7Z4K8 759 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 NLGN4YQ8NFZ3 816 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 TM4SF18Q96CE8 201 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 CCNB1IP1Q9NPC3 277 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 H0YIG0 161 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 H3BNX3 289 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 SLC35E2P0CK97 266 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 MAOAP21397 527 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 SRYQ05066 204 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 GPR78Q96P69 363 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 SMPD3Q9NY59 655 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 L7N2F9 121 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 GDF1P27539 372 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 OR1E2P47887 323 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HSD17B7P56937 341 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 VAMP2P63027 116 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HES3Q5TGS1 186 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 ZADH2Q8N4Q0 377 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 ERVK-18Q9QC07 812 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 GRHPRQ9UBQ7 328 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 GNG8Q9UK08 70 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HMX2A2RU54 273 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 FABP12A6NFH5 140 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HMGN1P05114 100 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 PTGER1P34995 402 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 IL20RBQ6UXL0 311 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 TREML1Q86YW5 311 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 CCNL2Q96S94 520 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 BEX1Q9HBH7 125 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF3P17036 446 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HTR1EP28566 365 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 MVB12AQ96EY5 273 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 WDR12Q9GZL7 423 aaKnown RBP12.1□□□□□ -0.47
PTCH1-207ENST00000429896 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
PTCH1-207ENST00000429896 HCKP08631 526 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 MRPL3P09001 348 aaKnown RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 NUDT6P53370 316 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR2A1Q8NGT9 310 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 CHTF18Q8WVB6 975 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 KCNE4Q8WWG9 221 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SLC6A20Q9NP91 592 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 BOKQ9UMX3 212 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 GPR45Q9Y5Y3 372 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms