RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 LHPPQ9H008 270 aa19.83■□□□□ 0.77
ABCF3-202ENST00000421340 CDCP1Q9H5V8 836 aa19.83■□□□□ 0.77
ABCF3-202ENST00000421340 CCDC86Q9H6F5 360 aaKnown RBP19.83■□□□□ 0.77
ABCF3-202ENST00000421340 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.83■□□□□ 0.77
ABCF3-202ENST00000421340 KLK10O43240 276 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 HNRNPRO43390 633 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 ITGA10O75578 1167 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 UTS2O95399 124 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 LGI1O95970 557 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 CYP4B1P13584 511 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 NID1P14543 1247 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 WT1P19544 449 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 ENDOUP21128 410 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 DCTP40126 519 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 RFX3P48380 749 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 ERFP50548 548 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 EEF1A1P68104 462 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 MAPK14Q16539 360 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 KLHL26Q53HC5 615 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 EIPR1Q53HC9 387 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 PIWIL3Q7Z3Z3 882 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 FAM86B1Q8N7N1 296 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 SMYD1Q8NB12 490 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 GPR32P1Q8NGA4 272 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 OR4C3Q8NH37 302 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 PYDC1Q8WXC3 89 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 GEMIN6Q8WXD5 167 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 SLC35B4Q969S0 331 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 SEPHS2Q99611 448 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 RSPO3Q9BXY4 272 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 QRSL1Q9H0R6 528 aaKnown RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 IL1RAPQ9NPH3 570 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 TEKT2Q9UIF3 430 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 AURKCQ9UQB9 309 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 POLHQ9Y253 713 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 ZNF443Q9Y2A4 671 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-202ENST00000421340 DTNAQ9Y4J8 743 aa19.82■□□□□ 0.76
ABCF3-202ENST00000421340 A0A1W2PQD3 144 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 H3BNX3 289 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 ZNF354AO60765 605 aaPredicted RBP19.81■□□□□ 0.76
ABCF3-202ENST00000421340 MAGEA2P43356 314 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 SSR4P51571 173 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 KCNC4Q03721 635 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 CDC20Q12834 499 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 SRSF6Q13247 344 aaKnown RBP19.81■□□□□ 0.76
ABCF3-202ENST00000421340 NTRK2Q16620 822 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 MEP1AQ16819 746 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 TBCELQ5QJ74 424 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 C16orf47Q6ZP98 133 aaPredicted RBP19.81■□□□□ 0.76
ABCF3-202ENST00000421340 VTCN1Q7Z7D3 282 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 VRK2Q86Y07 508 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 GPALPP1Q8IXQ4 340 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 PRR22Q8IZ63 422 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 APOBEC4Q8WW27 367 aaKnown RBP19.81■□□□□ 0.76
ABCF3-202ENST00000421340 TMCO6Q96DC7 493 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 CHID1Q9BWS9 393 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 WDR70Q9NW82 654 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 KLHL28Q9NXS3 571 aa19.81■□□□□ 0.76
ABCF3-202ENST00000421340 CFAP54Q96N23 3096 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 PCSK5Q92824 1860 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 MASP2O00187 686 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 EFSO43281 561 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 TPST1O60507 370 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 UGT2B11O75310 529 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 KRT36O76013 467 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 CAPNS1P04632 268 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 FCGR1AP12314 374 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 FGFBP1Q14512 234 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 ZNF791Q3KP31 576 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 GRAMD1BQ3KR37 738 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 PDZK1Q5T2W1 519 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 GRAMD2AQ8IUY3 354 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 BRIX1Q8TDN6 353 aaKnown RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 RNF138Q8WVD3 245 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 GATA6Q92908 595 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 HGDQ93099 445 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 SPACA9Q96E40 222 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 NAF1Q96HR8 494 aaKnown RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 C7orf34Q96L11 122 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 SECISBP2Q96T21 854 aaKnown RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 ZBTB20Q9HC78 741 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-202ENST00000421340 SLC13A4Q9UKG4 626 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 ABCG2Q9UNQ0 655 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 SLC9A8Q9Y2E8 581 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 CHST2Q9Y4C5 530 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 WDFY3Q8IZQ1 3526 aa19.8■□□□□ 0.76
ABCF3-202ENST00000421340 CDHR4A6H8M9 788 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 SERINC4A6NH21 518 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 ALG1L2C9J202 215 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 SCDO00767 359 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 FADS1O60427 444 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 OXSR1O95747 527 aaPredicted RBP19.79■□□□□ 0.76
ABCF3-202ENST00000421340 HPGDP15428 266 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 ITGA2P17301 1181 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 EIF2S3P41091 472 aaKnown RBP19.79■□□□□ 0.76
ABCF3-202ENST00000421340 RPP38P78345 283 aaKnown RBP19.79■□□□□ 0.76
ABCF3-202ENST00000421340 NRF1Q16656 503 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 ACER2Q5QJU3 275 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 ATP1A1-AS1Q5TC04 95 aa19.79■□□□□ 0.76
ABCF3-202ENST00000421340 TMEM81Q6P7N7 255 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms