RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DSN1Q9H410 356 aa18.7■□□□□ 0.58
PKNOX1-202ENST00000418336 NEUROD4Q9HD90 331 aa18.7■□□□□ 0.58
PKNOX1-202ENST00000418336 CHST11Q9NPF2 352 aa18.7■□□□□ 0.58
PKNOX1-202ENST00000418336 TAS2R10Q9NYW0 307 aa18.7■□□□□ 0.58
PKNOX1-202ENST00000418336 MARCOQ9UEW3 520 aaPredicted RBP18.7■□□□□ 0.58
PKNOX1-202ENST00000418336 NKX2-6A6NCS4 301 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 ALG1L2C9J202 215 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 HNRNPRO43390 633 aaKnown RBP18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 OXSR1O95747 527 aaPredicted RBP18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 ALOX5P09917 674 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 TBXA2RP21731 343 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 CLDN15P56746 228 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 CLDN18P56856 261 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 TMEM44Q2T9K0 475 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 PGS1Q32NB8 556 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 SLC9B1Q4ZJI4 515 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 NSUN5P2Q63ZY6 315 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 ZNF295-AS1Q8N0V1 137 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 CLEC4FQ8N1N0 589 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 OR56A1Q8NGH5 318 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 OR5AK3PQ8NH89 298 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 CA5BP1Q8WTZ4 195 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 CDS1Q92903 461 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 MARVELD3Q96A59 401 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 TRIM8Q9BZR9 551 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 NKIRAS1Q9NYS0 192 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 COQ3Q9NZJ6 369 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 MED11Q9P086 117 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 MRTO4Q9UKD2 239 aaKnown RBP18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 GPR45Q9Y5Y3 372 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 ABCA12Q86UK0 2595 aa18.69■□□□□ 0.58
PKNOX1-202ENST00000418336 NPIPB9F8W1W9 429 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 ANGPTL1O95841 491 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 ZNF708P17019 499 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 DPP4P27487 766 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 LCN1P31025 176 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 RFX3P48380 749 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 PRIM2P49643 509 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 STARP49675 285 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 PSMD4P55036 377 aaKnown RBP18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 DSCR4P56555 118 aaPredicted RBP18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 UFM1P61960 85 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 TOMM20Q15388 145 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 LSM12Q3MHD2 195 aaKnown RBP18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 SPANXN4Q5MJ08 99 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 ATG16L1Q676U5 607 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 SZRD1Q7Z422 152 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 TRIM42Q8IWZ5 723 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 PM20D2Q8IYS1 436 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 OR14L1PQ8NHC6 308 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 DUSP19Q8WTR2 217 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 UCN2Q96RP3 112 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 TUBA1CQ9BQE3 449 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 BTBD2Q9BX70 525 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 ACTRT3Q9BYD9 372 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 PPP4R1LQ9P1A2 415 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 SNX8Q9Y5X2 465 aa18.68■□□□□ 0.58
PKNOX1-202ENST00000418336 DOCK7Q96N67 2140 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 GOLGA8QA0A0J9YX86 632 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 GOLGA8OA6NCC3 632 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MBD3L4A6NDZ8 208 aaPredicted RBP18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MBD3L3A6NE82 208 aaPredicted RBP18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MBD3L5A6NJ08 208 aaPredicted RBP18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 CD8B2A6NJW9 211 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 GOLGA8NF8WBI6 632 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 SASH3O75995 380 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 KITP10721 976 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 CHMP24386 653 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MSX1P28360 303 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 TIMP3P35625 211 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 TP53BP2Q13625 1128 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 CD226Q15762 336 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 IFNEQ86WN2 208 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 RELL2Q8NC24 303 aaPredicted RBP18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MBD3L2Q8NHZ7 208 aaPredicted RBP18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 ZPLD1Q8TCW7 415 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 MOAP1Q96BY2 351 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 C1GALT1C1Q96EU7 318 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 NPAS1Q99742 590 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 SPOCK3Q9BQ16 436 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 DPY30Q9C005 99 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 ALKBH4Q9NXW9 302 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 AKAP9Q99996 3911 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 LRBAP50851 2863 aa18.67■□□□□ 0.58
PKNOX1-202ENST00000418336 POU6F2P78424 691 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 STX5Q13190 355 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 PLXDC2Q6UX71 529 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 SPATA19Q7Z5L4 167 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 ANKRD46Q86W74 232 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 LACC1Q8IV20 430 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 COX18Q8N8Q8 333 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 C9orf106Q8NAJ2 232 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 OR5D16Q8NGK9 328 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 GOT1L1Q8NHS2 421 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 ACTRT2Q8TDY3 377 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 OR7D2Q96RA2 312 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 OR52B2Q96RD2 323 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms