RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 PIGUQ9H490 435 aa15.77■□□□□ 0.12
HSPG2-204ENST00000412328 COQ3Q9NZJ6 369 aa15.77■□□□□ 0.12
HSPG2-204ENST00000412328 PPP4R1LQ9P1A2 415 aa15.77■□□□□ 0.12
HSPG2-204ENST00000412328 MARCOQ9UEW3 520 aaPredicted RBP15.77■□□□□ 0.12
HSPG2-204ENST00000412328 ANKHD1Q8IWZ3 2542 aaKnown RBP15.77■□□□□ 0.12
HSPG2-204ENST00000412328 MBD3L4A6NDZ8 208 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MBD3L3A6NE82 208 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MBD3L5A6NJ08 208 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 AHRRA9YTQ3 701 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 ALG1L2C9J202 215 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 RNASET2O00584 256 aaKnown RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 HDAC3O15379 428 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 CPN1P15169 458 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 ZNF708P17019 499 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MSX1P28360 303 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 IL12AP29459 219 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 PSMD4P55036 377 aaKnown RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 TMEM44Q2T9K0 475 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 CCNJQ5T5M9 372 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 NSUN5P2Q63ZY6 315 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 FIGNL1Q6PIW4 674 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 SZRD1Q7Z422 152 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MARCH3Q86UD3 253 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 IFNEQ86WN2 208 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 WDR75Q8IWA0 830 aaKnown RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 PM20D2Q8IYS1 436 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 TNIP2Q8NFZ5 429 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 OR56A1Q8NGH5 318 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 OR4C3Q8NH37 302 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 OR5AK3PQ8NH89 298 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 OR14L1PQ8NHC6 308 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MBD3L2Q8NHZ7 208 aaPredicted RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 UCK2Q9BZX2 261 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 TAS2R10Q9NYW0 307 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 MRTO4Q9UKD2 239 aaKnown RBP15.76■□□□□ 0.11
HSPG2-204ENST00000412328 KCNE3Q9Y6H6 103 aa15.76■□□□□ 0.11
HSPG2-204ENST00000412328 CD8B2A6NJW9 211 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 FAM90A27PA6NNH2 459 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 NPIPB9F8W1W9 429 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 ANGPTL1O95841 491 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 C1QCP02747 245 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 ALOX5P09917 674 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 TBXA2RP21731 343 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 EPHA3P29320 983 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 ZFP36L2P47974 494 aaKnown RBP15.75■□□□□ 0.11
HSPG2-204ENST00000412328 RFX3P48380 749 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 CCT3P49368 545 aaKnown RBP15.75■□□□□ 0.11
HSPG2-204ENST00000412328 PRIM2P49643 509 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 DSCR4P56555 118 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-204ENST00000412328 CLDN15P56746 228 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 STX5Q13190 355 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 GANABQ14697 944 aaKnown RBP15.75■□□□□ 0.11
HSPG2-204ENST00000412328 TOMM20Q15388 145 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 SPANXN4Q5MJ08 99 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 LACC1Q8IV20 430 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 ZNF295-AS1Q8N0V1 137 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 C1GALT1C1Q96EU7 318 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 ATP6V1G3Q96LB4 118 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 TUBA1CQ9BQE3 449 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 BTBD2Q9BX70 525 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 DSN1Q9H410 356 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 WDR55Q9H6Y2 383 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-204ENST00000412328 MANSC1Q9H8J5 431 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 NKIRAS1Q9NYS0 192 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 MED11Q9P086 117 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 CLCF1Q9UBD9 225 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 GPR45Q9Y5Y3 372 aa15.75■□□□□ 0.11
HSPG2-204ENST00000412328 HCRTR2O43614 444 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 CHMP24386 653 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 DPP4P27487 766 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 LCN1P31025 176 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 TIMP3P35625 211 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 ZNF136P52737 540 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 TP53BP2Q13625 1128 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 CD226Q15762 336 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 LSM12Q3MHD2 195 aaKnown RBP15.74■□□□□ 0.11
HSPG2-204ENST00000412328 SLC9B1Q4ZJI4 515 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
HSPG2-204ENST00000412328 ATG16L1Q676U5 607 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 TRIM42Q8IWZ5 723 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 CLEC4FQ8N1N0 589 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 COX18Q8N8Q8 333 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 ZPLD1Q8TCW7 415 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 MOAP1Q96BY2 351 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 UCN2Q96RP3 112 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 PRPF18Q99633 342 aaKnown RBP15.74■□□□□ 0.11
HSPG2-204ENST00000412328 NPAS1Q99742 590 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 SPOCK3Q9BQ16 436 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 ACTRT3Q9BYD9 372 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 DPY30Q9C005 99 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 DKKL1Q9UK85 242 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 CAMK2AQ9UQM7 478 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 SNX8Q9Y5X2 465 aa15.74■□□□□ 0.11
HSPG2-204ENST00000412328 GOLGA8QA0A0J9YX86 632 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 A0A1W2PQD3 144 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 GOLGA8OA6NCC3 632 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 E9PBE3 544 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 GOLGA8NF8WBI6 632 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 STARP49675 285 aa15.73■□□□□ 0.11
HSPG2-204ENST00000412328 UFM1P61960 85 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms