RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 NDUFV2P19404 249 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 SOX18P35713 384 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 TALDO1P37837 337 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 DUSP6Q16828 381 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 TMEM196Q5HYL7 178 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 PLET1Q6UQ28 207 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 LINC00299Q6ZSB3 139 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 GDPD3Q7L5L3 318 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 CXXC5Q7LFL8 322 aaKnown RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 GAL3ST3Q96A11 431 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 SLC35A4Q96G79 324 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 NT5DC2Q9H857 520 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 CD93Q9NPY3 652 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 USP36Q9P275 1121 aaKnown RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 ZC3H12DA2A288 527 aaKnown RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 SOCS6O14544 535 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 PROM1O43490 865 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 PSKH1P11801 424 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 LIMS1P48059 325 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 QPRTQ15274 297 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 ZNHIT3Q15649 155 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 ATP6V1C2Q8NEY4 427 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 BBS1Q8NFJ9 593 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-204ENST00000406949 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 C1QTNF2Q9BXJ5 285 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 SATB2Q9UPW6 733 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 PLXND1Q9Y4D7 1925 aa11.13□□□□□ -0.63
PCNX4-204ENST00000406949 FAM240BA0A1B0GVZ2 78 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 A0A1W2PPK0 400 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ACP2P11117 423 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 HPGDP15428 266 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 CSTF1Q05048 431 aaKnown RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 TSPAN31Q12999 210 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DSG2Q14126 1118 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DUSP5Q16690 384 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 EIPR1Q53HC9 387 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 C12orf73Q69YU5 71 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 OR51L1Q8NGJ5 315 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SFXN5Q8TD22 340 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 TRMT61AQ96FX7 289 aaKnown RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 NLGN3Q9NZ94 848 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ZNF443Q9Y2A4 671 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 LOC105369274A0A096LPK9 316 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 LOC102723532A0A0G2JNH3 316 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 A0A1B0GVC2 190 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 A6NIN4 97 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ZNF670-ZNF695F2Z2N8 137 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 J3QLW9 94 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 CHST10O43529 356 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 HYAL3O43820 417 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 B3GALNT1O75752 331 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 KCNK2O95069 426 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 HMGN1P05114 100 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 GYPBP06028 91 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ZNF19P17023 458 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ACVR2AP27037 513 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SAMD14Q8IZD0 417 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 OR4N4Q8N0Y3 316 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 NLGN4YQ8NFZ3 816 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 OR4C6Q8NH72 309 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SPRYD4Q8WW59 207 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DNAJA3Q96EY1 480 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 MTHFD2LQ9H903 347 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SOHLH2Q9NX45 425 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ACTR10Q9NZ32 417 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 ZNF624Q9P2J8 865 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 NDOR1Q9UHB4 597 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 MUTYHQ9UIF7 546 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 DIMT1Q9UNQ2 313 aaKnown RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 OBSL1O75147 1896 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 HTR3EA5X5Y0 456 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 RIIAD1A6NNX1 92 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 CENPXA8MT69 81 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 C12orf71A8MTZ7 269 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 SGK494L7N484 410 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 EGFP01133 1207 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
PCNX4-204ENST00000406949 AKT2P31751 481 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 CD83Q01151 205 aa11.12□□□□□ -0.63
PCNX4-204ENST00000406949 GPR18Q14330 331 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms