RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TSPAN7P41732 249 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 RGS6P49758 472 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 DAPP51397 102 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SLC25A1P53007 311 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CDH12P55289 794 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CDK5Q00535 292 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 DUSP7Q16829 419 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SLC6A19Q695T7 634 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 BMP8AQ7Z5Y6 402 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 VTCN1Q7Z7D3 282 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 COX18Q8N8Q8 333 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM234Q8WY98 164 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 C12orf43Q96C57 262 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TMCO6Q96DC7 493 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SPNS1Q9H2V7 528 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 EME2A4GXA9 379 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 FAM149AA5PLN7 773 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GRXCR1A8MXD5 290 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SCG5P05408 212 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MATN1P21941 496 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SOX6P35712 828 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF846Q147U1 533 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 C18orf21Q32NC0 220 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 ADPRHL1Q8NDY3 354 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GPR32P1Q8NGA4 272 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GNPDA2Q8TDQ7 276 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 FAR1Q8WVX9 515 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 LGALS12Q96DT0 336 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 MBOAT4Q96T53 435 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 CMC2Q9NRP2 79 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SIDT1Q9NXL6 827 aaKnown RBP5.47□□□□□ -1.53
PTPRD-206ENST00000397617 SELENONQ9NZV5 590 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM98Q9Y2Y6 226 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 GPSM3Q9Y4H4 160 aa5.47□□□□□ -1.53
PTPRD-206ENST00000397617 TRDV1A0A1B0GX56 115 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 TCRBV16S1A1N1A0A5B0 115 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ALG1L2C9J202 215 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 YY2O15391 372 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 SLC28A2O43868 658 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 RAF1P04049 648 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 TSPAN19P0C672 248 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ATP6V1B1P15313 513 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 PPP5CP53041 499 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 RAG2P55895 527 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ACTA2P62736 377 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ACTG2P63267 376 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 MRPS10P82664 201 aaKnown RBP5.46□□□□□ -1.53
PTPRD-206ENST00000397617 SPIBQ01892 262 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 RAB39AQ14964 217 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 SPHARQ15513 63 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 C6orf132Q5T0Z8 1188 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 HSDL2Q6YN16 418 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 TMPRSS11AQ6ZMR5 421 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 USP43Q70EL4 1123 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 CLVS1Q8IUQ0 354 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ACBD7Q8N6N7 88 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 DOCK7Q96N67 2140 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 MGLLQ99685 303 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 LOC102725191A0A1B0GVB3 256 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 LOC110117498-PIK3R3F6TDL0 507 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 HAT1O14929 419 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ACP2P11117 423 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF136P52737 540 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 MAPK11Q15759 364 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 C11orf91Q3C1V1 193 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF404Q494X3 552 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 HORMAD2Q8N7B1 307 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 FAM86B1Q8N7N1 296 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF540Q8NDQ6 660 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 OR52P1PQ8NH57 321 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 PIK3R3Q92569 461 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 EXOSC8Q96B26 276 aaKnown RBP5.46□□□□□ -1.53
PTPRD-206ENST00000397617 UBL7Q96S82 380 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-206ENST00000397617 MND1Q9BWT6 205 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 OR1A2Q9Y585 309 aa5.46□□□□□ -1.53
PTPRD-206ENST00000397617 LRRK2Q5S007 2527 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 A0A087WUU8 490 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 H3BMQ9 156 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CTSVO60911 334 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 IGKV3-11P04433 115 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 EMX1Q04741 257 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF91Q05481 1191 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 CDC20Q12834 499 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 STX4Q12846 297 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 FBXO48Q5FWF7 155 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 MCATQ8IVS2 390 aaKnown RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF619Q8N2I2 560 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 SCAIQ8N9R8 606 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 IL17FQ96PD4 163 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 PLA2G2FQ9BZM2 168 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 A4GNTQ9UNA3 340 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 NOX1Q9Y5S8 564 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 IGF2RP11717 2491 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 PRAMEF33A0A0G2JMD5 474 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 KDM4EB2RXH2 506 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 PRAMEF10O60809 474 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 TRIM3O75382 744 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ARL6IP5O75915 188 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF432O94892 652 aa5.46□□□□□ -1.54
PTPRD-206ENST00000397617 GNAO1P09471 354 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms