RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 EXOSC6Q5RKV6 272 aaKnown RBP27.89■■■□□ 2.06
CMTM4-202ENST00000394106 AGBL2Q5U5Z8 902 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 APOOLQ6UXV4 268 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 ZAR1Q86SH2 424 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 CLECL1Q8IZS7 167 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 OR4C3Q8NH37 302 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 RAB3IL1Q8TBN0 382 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 FAM110BQ8TC76 370 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 SFXN5Q8TD22 340 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 STACQ99469 402 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 BTBD2Q9BX70 525 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 ACTRT3Q9BYD9 372 aa27.89■■■□□ 2.06
CMTM4-202ENST00000394106 HSPB2A8KAH6 182 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 SDHDO14521 159 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 CPN1P15169 458 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 HK1P19367 917 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 HCFC1P51610 2035 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 RCAN2Q14206 197 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 HSPB2Q16082 182 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 CPEB4Q17RY0 729 aaKnown RBP eCLIP27.88■■■□□ 2.05
CMTM4-202ENST00000394106 NSUN5P2Q63ZY6 315 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 CDC73Q6P1J9 531 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 MEX3BQ6ZN04 569 aaKnown RBP27.88■■■□□ 2.05
CMTM4-202ENST00000394106 LRRC34Q8IZ02 419 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 MOAP1Q96BY2 351 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 PIGUQ9H490 435 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 PTGES2Q9H7Z7 377 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 DUSP22Q9NRW4 184 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 NUP214P35658 2090 aaPredicted RBP27.88■■■□□ 2.05
CMTM4-202ENST00000394106 KIAA1549Q9HCM3 1950 aa27.88■■■□□ 2.05
CMTM4-202ENST00000394106 GOLGA8QA0A0J9YX86 632 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 GOLGA8OA6NCC3 632 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 GOLGA8NF8WBI6 632 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 HDAC3O15379 428 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 OXSR1O95747 527 aaPredicted RBP27.87■■■□□ 2.05
CMTM4-202ENST00000394106 TFF3Q07654 80 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 C17orf67Q0P5P2 114 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 WDR75Q8IWA0 830 aaKnown RBP27.87■■■□□ 2.05
CMTM4-202ENST00000394106 GATSQ8NAP1 163 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 ADAMTS15Q8TE58 950 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 SPOCK3Q9BQ16 436 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 TUBA1CQ9BQE3 449 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 G6PC3Q9BUM1 346 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 WDR55Q9H6Y2 383 aaPredicted RBP27.87■■■□□ 2.05
CMTM4-202ENST00000394106 NPDC1Q9NQX5 325 aaPredicted RBP27.87■■■□□ 2.05
CMTM4-202ENST00000394106 GPATCH2Q9NW75 528 aa27.87■■■□□ 2.05
CMTM4-202ENST00000394106 TRPC5OSA6NMA1 111 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 IL2RAP01589 272 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 KRT16P08779 473 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 TBXA2RP21731 343 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 LHX2P50458 406 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 NME5P56597 212 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 RAET1LQ5VY80 246 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 OGFOD2Q6N063 350 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 NAXEQ8NCW5 288 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 OR8J2Q8NGG1 315 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 OR4A15Q8NGL6 344 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 ZPLD1Q8TCW7 415 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 ENKD1Q9H0I2 346 aa27.86■■■□□ 2.05
CMTM4-202ENST00000394106 PKDREJQ9NTG1 2253 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 ITPR2Q14571 2701 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 CD8B2A6NJW9 211 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 RNASET2O00584 256 aaKnown RBP27.85■■■□□ 2.05
CMTM4-202ENST00000394106 ANKRD28O15084 1053 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 NDUFB5O43674 189 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 NGFRP08138 427 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 ALDOCP09972 364 aaKnown RBP27.85■■■□□ 2.05
CMTM4-202ENST00000394106 HPGDP15428 266 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 CHMP24386 653 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 EPHA3P29320 983 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 CEACAM8P31997 349 aaPredicted RBP27.85■■■□□ 2.05
CMTM4-202ENST00000394106 TIMP3P35625 211 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 B3GALT5-AS1P59052 145 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 OCRLQ01968 901 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 GANABQ14697 944 aaKnown RBP27.85■■■□□ 2.05
CMTM4-202ENST00000394106 BHLHB9Q6PI77 547 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 GDF7Q7Z4P5 450 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 ANKRD46Q86W74 232 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 CLEC4FQ8N1N0 589 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 TESCQ96BS2 214 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 C1GALT1C1Q96EU7 318 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 TRIM8Q9BZR9 551 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 CALHM2Q9HA72 323 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 UBQLN4Q9NRR5 601 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 GIN1Q9NXP7 522 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 PCDHGB4Q9UN71 923 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 KCNE3Q9Y6H6 103 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 NOTCH2Q04721 2471 aa27.85■■■□□ 2.05
CMTM4-202ENST00000394106 ALG1L2C9J202 215 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 ATP6V1C1P21283 382 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 MSX1P28360 303 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 LCN1P31025 176 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 CLNS1AP54105 237 aaKnown RBP27.84■■■□□ 2.05
CMTM4-202ENST00000394106 RPS26P62854 115 aaKnown RBP27.84■■■□□ 2.05
CMTM4-202ENST00000394106 SLC25A35Q3KQZ1 300 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 OR5M1Q8NGP8 315 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 PCNX3Q9H6A9 2034 aa27.84■■■□□ 2.05
CMTM4-202ENST00000394106 RNF103-CHMP3A0A140T963 221 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 SLCO1B7G3V0H7 640 aa27.83■■■□□ 2.05
CMTM4-202ENST00000394106 SCDO00767 359 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms