RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ACTA1P68133 377 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 ACY1Q03154 408 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 NFATC4Q14934 902 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 DEFB133Q30KQ1 61 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 FOXB2Q5VYV0 432 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 WASH2PQ6VEQ5 465 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 PTRH1Q86Y79 214 aaKnown RBP14.17□□□□□ -0.14
NPHP4-201ENST00000378156 POGLUT1Q8NBL1 392 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 VN1R2Q8NFZ6 395 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 HDHD5Q9BXW7 423 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 ASB6Q9NWX5 421 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 STUB1Q9UNE7 303 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 ABCA3Q99758 1704 aa14.17□□□□□ -0.14
NPHP4-201ENST00000378156 A0A1B0GTW7 788 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 A0A1B0GVI7 797 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SH3D21A4FU49 640 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 TRAPPC13A5PLN9 417 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 AP1G1O43747 822 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 HMGN2P05204 90 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CD97P48960 835 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 GDI2P50395 445 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 FOXRED2Q8IWF2 684 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 WFDC5Q8TCV5 224 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CREB3L4Q8TEY5 395 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 DNAJA3Q96EY1 480 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF559Q9BR84 538 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SLC6A16Q9GZN6 736 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 ARL6Q9H0F7 186 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SRA1Q9HD15 236 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 LOXHD1Q8IVV2 1947 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SLC22A31A6NKX4 558 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 RFXAPO00287 272 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 EEF1E1O43324 174 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CSTBP04080 98 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SPARCP09486 303 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 ALG10Q5BKT4 473 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 KCTD9Q7L273 389 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 TMEM151BQ8IW70 566 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 OR6C4Q8NGE1 309 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 OR9A2Q8NGT5 310 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SLC22A8Q8TCC7 542 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 NCDNQ9UBB6 729 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CPNE7Q9UBL6 633 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 KLF15Q9UIH9 416 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 KCNIP3Q9Y2W7 256 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 AGAP5A6NIR3 686 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 PCDH17O14917 1159 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 TAPBPO15533 448 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CLUP10909 449 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 ITGAMP11215 1152 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 IRS1P35568 1242 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 HBA1P69905 142 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 DCDC5Q6ZRR9 648 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 ACBD7Q8N6N7 88 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 DPCDQ9BVM2 203 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 MCOLN1Q9GZU1 580 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 HOXD1Q9GZZ0 328 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CCDC86Q9H6F5 360 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 A0A0A6YYC8 382 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 HTR3EA5X5Y0 456 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 I3L1I5 382 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 CREBL2O60519 120 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 SCGB1D2O95969 90 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 PYCR1P32322 319 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 NAA10P41227 235 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 MRPL58Q14197 206 aaKnown RBP14.16□□□□□ -0.14
NPHP4-201ENST00000378156 MBTPS1Q14703 1052 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 HHATLQ9HCP6 504 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 TMEM14AQ9Y6G1 99 aa14.16□□□□□ -0.14
NPHP4-201ENST00000378156 KIAA0355O15063 1070 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 RDH16O75452 317 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CFL1P23528 166 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 GLP1RP43220 463 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 SOX2P48431 317 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 NKX2-5P52952 324 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 GLT8D1Q68CQ7 371 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TBPL2Q6SJ96 375 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 NRMQ8IXM6 262 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 B3GNT7Q8NFL0 401 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 PMM1Q92871 262 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 ASB1Q9Y576 335 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 PTPRZ1P23471 2315 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TEX13CA0A0J9YWL9 993 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CD8B2A6NJW9 211 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 CD8BP10966 210 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 S1PR1P21453 382 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 HIST1H1TP22492 207 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 PSMB5P28074 263 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 RBMXP38159 391 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 RGS19P49795 217 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 NTRK2Q16620 822 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 SLC5A12Q1EHB4 618 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TMPRSS9Q7Z410 1059 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 KLBQ86Z14 1044 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TANKQ92844 425 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 FKBP10Q96AY3 582 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 FAM46AQ96IP4 442 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 PPIL3Q9H2H8 161 aaKnown RBP14.15□□□□□ -0.14
NPHP4-201ENST00000378156 A0A1W2PPK0 400 aa14.15□□□□□ -0.14
NPHP4-201ENST00000378156 TARM1B6A8C7 271 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms