RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 FAM47E-STBD1D6RA91 191 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 KLF11O14901 512 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 SCO2O43819 266 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 ALOX5P09917 674 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 ALDOCP09972 364 aaKnown RBP18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 TBXA2RP21731 343 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 CHMP24386 653 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 DPP4P27487 766 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 PRIM2P49643 509 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 DSCR4P56555 118 aaPredicted RBP18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 TOMM20Q15388 145 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 TMEM44Q2T9K0 475 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 CDC73Q6P1J9 531 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 MARCH3Q86UD3 253 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 LACC1Q8IV20 430 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 NAXEQ8NCW5 288 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 OR56A1Q8NGH5 318 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 OR14L1PQ8NHC6 308 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 FBXO30Q8TB52 745 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 DUSP19Q8WTR2 217 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 TESCQ96BS2 214 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 BTBD2Q9BX70 525 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 CALHM2Q9HA72 323 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 SDHAF3Q9NRP4 125 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 PPP4R1LQ9P1A2 415 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 POLQO75417 2590 aa18.62■□□□□ 0.57
SMNDC1-201ENST00000369592 PDZD2O15018 2839 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 NKX2-6A6NCS4 301 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MBD3L4A6NDZ8 208 aaPredicted RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MBD3L3A6NE82 208 aaPredicted RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MBD3L5A6NJ08 208 aaPredicted RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 RNASET2O00584 256 aaKnown RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 ZNF195O14628 629 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 HDAC3O15379 428 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MSX1P28360 303 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 CLDN18P56856 261 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 LASP1Q14847 261 aaKnown RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 OR4F3Q6IEY1 312 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 IFNEQ86WN2 208 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MCEMP1Q8IX19 187 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 TNIP2Q8NFZ5 429 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MBD3L2Q8NHZ7 208 aaPredicted RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MGARPQ8TDB4 240 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MOAP1Q96BY2 351 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MAELQ96JY0 434 aaKnown RBP18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 YIPF4Q9BSR8 244 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 ACTRT3Q9BYD9 372 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MANSC1Q9H8J5 431 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 KCNJ16Q9NPI9 418 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 MED11Q9P086 117 aa18.61■□□□□ 0.57
SMNDC1-201ENST00000369592 OTOGQ6ZRI0 2925 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 SOX30O94993 753 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 OXSR1O95747 527 aaPredicted RBP18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 ANGPTL1O95841 491 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 COX6B1P14854 86 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 ZNF708P17019 499 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 C17orf67Q0P5P2 114 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 GANABQ14697 944 aaKnown RBP18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 BCL2A1Q16548 175 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 FIGNL1Q6PIW4 674 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 WDR75Q8IWA0 830 aaKnown RBP18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 CLECL1Q8IZS7 167 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 OR4K17Q8NGC6 315 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 OR10Q1Q8NGQ4 319 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 CDS1Q92903 461 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 C1GALT1C1Q96EU7 318 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 DTNBP1Q96EV8 351 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 OTUB1Q96FW1 271 aaPredicted RBP18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 TEX37Q96LM6 180 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 DPY30Q9C005 99 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 SERHL2Q9H4I8 314 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 AIG1Q9NVV5 245 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 NKIRAS1Q9NYS0 192 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 CAMK2AQ9UQM7 478 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 SNX8Q9Y5X2 465 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 KCNE3Q9Y6H6 103 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 TACC2O95359 2948 aa18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 ANKHD1Q8IWZ3 2542 aaKnown RBP18.6■□□□□ 0.57
SMNDC1-201ENST00000369592 FAM90A27PA6NNH2 459 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 HSPB2A8KAH6 182 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 NPIPB9F8W1W9 429 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 H2AFXP16104 143 aaPredicted RBP18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 RFX3P48380 749 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 STARP49675 285 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 CLDN15P56746 228 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 POU6F2P78424 691 aaPredicted RBP18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 SF3B4Q15427 424 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■□□□□ 9.1
SMNDC1-201ENST00000369592 HSPB2Q16082 182 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 PGS1Q32NB8 556 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 SLC25A35Q3KQZ1 300 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 GLYR1Q49A26 553 aaPredicted RBP18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 AP1ARQ63HQ0 302 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 ATG16L1Q676U5 607 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 ENPP6Q6UWR7 440 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 SZRD1Q7Z422 152 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 MAVSQ7Z434 540 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 GALNT10Q86SR1 603 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 COX18Q8N8Q8 333 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 SH3GL2Q99962 352 aa18.59■□□□□ 0.57
SMNDC1-201ENST00000369592 TUBA1CQ9BQE3 449 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms