RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TOMM20Q15388 145 aa8.8□□□□□ -1
SMG6-202ENST00000354901 TCEA2Q15560 299 aa8.8□□□□□ -1
SMG6-202ENST00000354901 PDSS1Q5T2R2 415 aa8.8□□□□□ -1
SMG6-202ENST00000354901 CCNJQ5T5M9 372 aa8.8□□□□□ -1
SMG6-202ENST00000354901 CYB5R2Q6BCY4 276 aa8.8□□□□□ -1
SMG6-202ENST00000354901 PLAG1Q6DJT9 500 aa8.8□□□□□ -1
SMG6-202ENST00000354901 TECPR1Q7Z6L1 1165 aa8.8□□□□□ -1
SMG6-202ENST00000354901 GATAD2BQ8WXI9 593 aa8.8□□□□□ -1
SMG6-202ENST00000354901 YIPF5Q969M3 257 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SLC25A46Q96AG3 418 aa8.8□□□□□ -1
SMG6-202ENST00000354901 TREX2Q9BQ50 279 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 TMEM43Q9BTV4 400 aa8.8□□□□□ -1
SMG6-202ENST00000354901 BHLHE41Q9C0J9 482 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 NMNAT1Q9HAN9 279 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 CHMP1AQ9HD42 196 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 CD93Q9NPY3 652 aa8.8□□□□□ -1
SMG6-202ENST00000354901 PLEKHB1Q9UF11 243 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 PCYT1BQ9Y5K3 369 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 OR6C74A6NCV1 312 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SMAD9O15198 467 aaKnown RBP8.8□□□□□ -1
SMG6-202ENST00000354901 MID1O15344 667 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SPDEFO95238 335 aa8.8□□□□□ -1
SMG6-202ENST00000354901 IFNW1P05000 195 aa8.8□□□□□ -1
SMG6-202ENST00000354901 HMGN1P05114 100 aa8.8□□□□□ -1
SMG6-202ENST00000354901 RHOP08100 348 aa8.8□□□□□ -1
SMG6-202ENST00000354901 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 CHMP24386 653 aa8.8□□□□□ -1
SMG6-202ENST00000354901 MMP12P39900 470 aa8.8□□□□□ -1
SMG6-202ENST00000354901 CRYBB2P43320 205 aa8.8□□□□□ -1
SMG6-202ENST00000354901 MANFP55145 182 aaKnown RBP8.8□□□□□ -1
SMG6-202ENST00000354901 ST8SIA6P61647 398 aa8.8□□□□□ -1
SMG6-202ENST00000354901 MC2RQ01718 297 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SERTAD2Q14140 314 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SGCAQ16586 387 aa8.8□□□□□ -1
SMG6-202ENST00000354901 C9orf152Q5JTZ5 239 aa8.8□□□□□ -1
SMG6-202ENST00000354901 FAM74A1Q5RGS3 127 aa8.8□□□□□ -1
SMG6-202ENST00000354901 METTL11BQ5VVY1 283 aa8.8□□□□□ -1
SMG6-202ENST00000354901 TFAP2EQ6VUC0 442 aa8.8□□□□□ -1
SMG6-202ENST00000354901 RBMS3Q6XE24 437 aaKnown RBP8.8□□□□□ -1
SMG6-202ENST00000354901 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SFTPA1Q8IWL2 248 aa8.8□□□□□ -1
SMG6-202ENST00000354901 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
SMG6-202ENST00000354901 OR9A1PQ8NGU1 263 aa8.8□□□□□ -1
SMG6-202ENST00000354901 GEMIN6Q8WXD5 167 aaKnown RBP8.8□□□□□ -1
SMG6-202ENST00000354901 ZNF707Q96C28 371 aaPredicted RBP8.8□□□□□ -1
SMG6-202ENST00000354901 SPSB2Q99619 263 aa8.8□□□□□ -1
SMG6-202ENST00000354901 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
SMG6-202ENST00000354901 TAC3Q9UHF0 121 aa8.8□□□□□ -1
SMG6-202ENST00000354901 IRAK3Q9Y616 596 aa8.8□□□□□ -1
SMG6-202ENST00000354901 OBSL1O75147 1896 aa8.8□□□□□ -1
SMG6-202ENST00000354901 DNAH14Q0VDD8 3507 aa8.8□□□□□ -1
SMG6-202ENST00000354901 FXYD6-FXYD2A0A087WZ82 144 aa8.79□□□□□ -1
SMG6-202ENST00000354901 CD8B2A6NJW9 211 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ARPC5O15511 151 aa8.79□□□□□ -1
SMG6-202ENST00000354901 HCN1O60741 890 aa8.79□□□□□ -1
SMG6-202ENST00000354901 CD8BP10966 210 aa8.79□□□□□ -1
SMG6-202ENST00000354901 PRKAG1P54619 331 aa8.79□□□□□ -1
SMG6-202ENST00000354901 WDR5P61964 334 aaKnown RBP8.79□□□□□ -1
SMG6-202ENST00000354901 ZNF91Q05481 1191 aa8.79□□□□□ -1
SMG6-202ENST00000354901 SF3A2Q15428 464 aaKnown RBP8.79□□□□□ -1
SMG6-202ENST00000354901 HFEQ30201 348 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ZNF425Q6IV72 752 aa8.79□□□□□ -1
SMG6-202ENST00000354901 RTL10Q7L3V2 364 aa8.79□□□□□ -1
SMG6-202ENST00000354901 WDR53Q7Z5U6 358 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 C12orf40Q86WS4 652 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TBC1D19Q8N5T2 526 aa8.79□□□□□ -1
SMG6-202ENST00000354901 HORMAD2Q8N7B1 307 aa8.79□□□□□ -1
SMG6-202ENST00000354901 CA5BP1Q8WTZ4 195 aa8.79□□□□□ -1
SMG6-202ENST00000354901 MRGPRX3Q96LB0 322 aa8.79□□□□□ -1
SMG6-202ENST00000354901 MACROD1Q9BQ69 325 aa8.79□□□□□ -1
SMG6-202ENST00000354901 WDR77Q9BQA1 342 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
SMG6-202ENST00000354901 EFCAB11Q9BUY7 163 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ZNF436Q9C0F3 470 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 FXYD6Q9H0Q3 95 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ZBP1Q9H171 429 aa8.79□□□□□ -1
SMG6-202ENST00000354901 C14orf105Q9NVL8 296 aa8.79□□□□□ -1
SMG6-202ENST00000354901 SLC39A1Q9NY26 324 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ANGPT4Q9Y264 503 aa8.79□□□□□ -1
SMG6-202ENST00000354901 CDH10Q9Y6N8 788 aa8.79□□□□□ -1
SMG6-202ENST00000354901 RANBP2P49792 3224 aaKnown RBP8.79□□□□□ -1
SMG6-202ENST00000354901 DOCK9Q9BZ29 2069 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ZNF106Q9H2Y7 1883 aaKnown RBP8.79□□□□□ -1
SMG6-202ENST00000354901 GLOD5A6NK44 160 aa8.79□□□□□ -1
SMG6-202ENST00000354901 PPM1DO15297 605 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ADAM11O75078 769 aa8.79□□□□□ -1
SMG6-202ENST00000354901 HBQ1P09105 142 aa8.79□□□□□ -1
SMG6-202ENST00000354901 HOXA1P49639 335 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 LIM2P55344 173 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TNFRSF17Q02223 184 aa8.79□□□□□ -1
SMG6-202ENST00000354901 NXPE4Q6UWF7 544 aa8.79□□□□□ -1
SMG6-202ENST00000354901 FAM83HQ6ZRV2 1179 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 GRASPQ7Z6J2 395 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 LAPTM4BQ86VI4 370 aa8.79□□□□□ -1
SMG6-202ENST00000354901 MARCH9Q86YJ5 346 aa8.79□□□□□ -1
SMG6-202ENST00000354901 OXR1Q8N573 874 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TCEANCQ8N8B7 351 aa8.79□□□□□ -1
SMG6-202ENST00000354901 OR4C15Q8NGM1 316 aa8.79□□□□□ -1
SMG6-202ENST00000354901 AP3S1Q92572 193 aa8.79□□□□□ -1
SMG6-202ENST00000354901 INTS12Q96CB8 462 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms