RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PNPLA3Q9NST1 481 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 FLRT3Q9NZU0 649 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 ZIM2Q9NZV7 527 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 B4GALT7Q9UBV7 327 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 BTNL2Q9UIR0 455 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 FAF1Q9UNN5 650 aaPredicted RBP16.42■□□□□ 0.22
USF2-202ENST00000343550 LIPGQ9Y5X9 500 aa16.42■□□□□ 0.22
USF2-202ENST00000343550 NKX2-6A6NCS4 301 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 OR14I1A6ND48 311 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 SNPHO15079 494 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 POLR3GO15318 223 aaPredicted RBP16.41■□□□□ 0.22
USF2-202ENST00000343550 SOX30O94993 753 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 IGFBP2P18065 325 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 GDF1P27539 372 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 RFX3P48380 749 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 MAN2A2P49641 1150 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 NUP107P57740 925 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 BHLHB9Q6PI77 547 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 CCDC71Q8IV32 467 aaPredicted RBP16.41■□□□□ 0.22
USF2-202ENST00000343550 OR5M9Q8NGP3 310 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 GOT1L1Q8NHS2 421 aaPredicted RBP16.41■□□□□ 0.22
USF2-202ENST00000343550 JADE3Q92613 823 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 CCDC115Q96NT0 180 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 KCNJ16Q9NPI9 418 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 NPDC1Q9NQX5 325 aaPredicted RBP16.41■□□□□ 0.22
USF2-202ENST00000343550 FBXO34Q9NWN3 711 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 C15orf41Q9Y2V0 281 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 ZNF407Q9C0G0 2248 aa16.41■□□□□ 0.22
USF2-202ENST00000343550 FAM90A27PA6NNH2 459 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 BCKDKO14874 412 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 TOXO94900 526 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 IL6P05231 212 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 UQCRC2P22695 453 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 ACVR2AP27037 513 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 PTPN6P29350 595 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 EVI2BP34910 448 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 SOAT1P35610 550 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 TFF3Q07654 80 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 FIGNL1Q6PIW4 674 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 GALNT10Q86SR1 603 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 MIER2Q8N344 545 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 ADAMTS15Q8TE58 950 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 CDS1Q92903 461 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 THOC1Q96FV9 657 aaKnown RBP16.4■□□□□ 0.22
USF2-202ENST00000343550 BTBD2Q9BX70 525 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 LDAHQ9H6V9 325 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 WIF1Q9Y5W5 379 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 KCNE3Q9Y6H6 103 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 POLQO75417 2590 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 TRGV5A0A0B4J1U4 118 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 HCN1O60741 890 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 CBR3O75828 277 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 TRAPPC6AO75865 159 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 UTS2O95399 124 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 HPNP05981 417 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 MATN1P21941 496 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
USF2-202ENST00000343550 POU6F2P78424 691 aaPredicted RBP16.4■□□□□ 0.22
USF2-202ENST00000343550 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.4■□□□□ 0.22
USF2-202ENST00000343550 ZNF585AQ6P3V2 769 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 PLCZ1Q86YW0 608 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 COX18Q8N8Q8 333 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 OR9I1Q8NGQ6 314 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 OR4C3Q8NH37 302 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 INPP5KQ9BT40 448 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 RTN4RQ9BZR6 473 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 ABCG2Q9UNQ0 655 aa16.4■□□□□ 0.22
USF2-202ENST00000343550 CELSR1Q9NYQ6 3014 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 FREM3P0C091 2139 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 RNF103-CHMP3A0A140T963 221 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 FIGNL2A6NMB9 653 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 AQP7O14520 342 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 KRT16P08779 473 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 MSX1P28360 303 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
USF2-202ENST00000343550 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 CCNJQ5T5M9 372 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 OR5M10Q6IEU7 315 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 APOOLQ6UXV4 268 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 ZAR1Q86SH2 424 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 CDH24Q86UP0 819 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 NEIL3Q8TAT5 605 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 STON2Q8WXE9 905 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 OR7D2Q96RA2 312 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 PANX1Q96RD7 426 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 TTYH2Q9BSA4 534 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 G6PC3Q9BUM1 346 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 SERHL2Q9H4I8 314 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 TNFRSF10DQ9UBN6 386 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 DNAJC13O75165 2243 aa16.39■□□□□ 0.21
USF2-202ENST00000343550 AKAP9Q99996 3911 aa16.38■□□□□ 0.21
USF2-202ENST00000343550 CCDC168Q8NDH2 2452 aa16.38■□□□□ 0.21
USF2-202ENST00000343550 CCDC154A6NI56 674 aa16.38■□□□□ 0.21
USF2-202ENST00000343550 DUXAA6NLW8 204 aa16.38■□□□□ 0.21
USF2-202ENST00000343550 B4DXG7 233 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms