RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 WDR20Q8TBZ3 569 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 APH1AQ96BI3 265 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 PRRC1Q96M27 445 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 FKBPLQ9UIM3 349 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF28P17035 718 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 MARCKSL1P49006 195 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 ELOCQ15369 112 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 XYLT1Q86Y38 959 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 OR6C4Q8NGE1 309 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 PINK1Q9BXM7 581 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 TMEM181Q9P2C4 612 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 PCDHGC4Q9Y5F7 938 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 CACNG2Q9Y698 323 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 PYCR1P32322 319 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ATP6AP1Q15904 470 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 CD300LGQ6UXG3 332 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF836Q6ZNA1 936 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 OR2M7Q8NG81 312 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 OR4E2Q8NGC2 313 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 PSMF1Q92530 271 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 FBXW11Q9UKB1 542 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 HAS3O00219 553 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 AREGP15514 252 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF546Q86UE3 836 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 SLC35D1Q9NTN3 355 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ACOXLQ9NUZ1 547 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 PTBP3O95758 552 aaKnown RBP16.76■□□□□ 0.27
SMAD4-201ENST00000342988 SYPP08247 313 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 USP50Q70EL3 339 aaPredicted RBP16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF417Q8TAU3 575 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 SGTBQ96EQ0 304 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF160Q9HCG1 818 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 IQSEC2Q5JU85 1478 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 SUSD5O60279 629 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 MT-ND4P03905 459 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 HLA-EP13747 358 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 RPS15AP62244 130 aaKnown RBP16.76■□□□□ 0.27
SMAD4-201ENST00000342988 OR4F3Q6IEY1 312 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 TXNDC5Q8NBS9 432 aaKnown RBP16.76■□□□□ 0.27
SMAD4-201ENST00000342988 AIG1Q9NVV5 245 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 RAB5AP20339 215 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 BTNL8Q6UX41 500 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 NUP43Q8NFH3 380 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 RNF24Q9Y225 148 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 DOCK7Q96N67 2140 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 C6orf47O95873 294 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 EBLN1P0CF75 366 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 HSF1Q00613 529 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 LFNGQ8NES3 379 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ITPKCQ96DU7 683 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 FKRPQ9H9S5 495 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 ACPPP15309 386 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 HOXA11P31270 313 aaPredicted RBP16.76■□□□□ 0.27
SMAD4-201ENST00000342988 TMEM97Q5BJF2 176 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 OR10K2Q6IF99 312 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 KLHDC1Q8N7A1 406 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 LGALS12Q96DT0 336 aa16.76■□□□□ 0.27
SMAD4-201ENST00000342988 METTL15A6NJ78 407 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 KIAA1324LA8MWY0 1029 aaPredicted RBP16.75■□□□□ 0.27
SMAD4-201ENST00000342988 CNTN5O94779 1100 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 AOC1P19801 751 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF266Q14584 549 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
SMAD4-201ENST00000342988 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 ZNF728P0DKX0 622 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 CCL23P55773 120 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 TAP2Q03519 686 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 DMWDQ09019 674 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 BANPQ8N9N5 519 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 HPSE2Q8WWQ2 592 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 PSMG2Q969U7 264 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 GATA5Q9BWX5 397 aaPredicted RBP16.75■□□□□ 0.27
SMAD4-201ENST00000342988 ACSS2Q9NR19 701 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 CATR1Q13166 79 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 SYT13Q7L8C5 426 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 RHEBL1Q8TAI7 183 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 A0A1W2PQL4 384 aaPredicted RBP16.75■□□□□ 0.27
SMAD4-201ENST00000342988 KLHL33A6NCF5 533 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 EOMESO95936 686 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 GABRA4P48169 554 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 TAS2R19P59542 299 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 LMX1AQ8TE12 382 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 BMI1P35226 326 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 RPS13P62277 151 aaKnown RBP16.75■□□□□ 0.27
SMAD4-201ENST00000342988 SRYQ05066 204 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 SLC14A1Q13336 389 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 LPCAT3Q6P1A2 487 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 DERL2Q9GZP9 239 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 GPR83Q9NYM4 423 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 HES2Q9Y543 173 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 LTN1O94822 1766 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 CD79AP11912 226 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 SELPP16109 830 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 ARSFP54793 590 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 SOHLH1Q5JUK2 328 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 AVPI1Q5T686 147 aa16.75■□□□□ 0.27
SMAD4-201ENST00000342988 C1orf87Q8N0U7 546 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms