RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 FNDC11Q9BVV2 318 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 CDCA4Q9BXL8 241 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 C11orf54Q9H0W9 315 aaPredicted RBP12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 MIXL1Q9H2W2 232 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 GLIPR2Q9H4G4 154 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 CCDC86Q9H6F5 360 aaKnown RBP12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 FZD3Q9NPG1 666 aa12.45□□□□□ -0.42
KCNIP3-201ENST00000295225 SHISA3A0PJX4 238 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SLITRK5O94991 958 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 PCDH8O95206 1070 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SCG5P05408 212 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CHRM4P08173 479 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MYOGP15173 224 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 DDCP20711 480 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MAT2AP31153 395 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 KRTCAP3Q53RY4 240 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SYT14P1Q58G82 188 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 UBE3DQ7Z6J8 389 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 FAM129CQ86XR2 697 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 OR52P1PQ8NH57 321 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SMPDL3AQ92484 453 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 REPS1Q96D71 796 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MED20Q9H944 212 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF221Q9UK13 617 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 LSM2Q9Y333 95 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 KLK4Q9Y5K2 254 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 A0A0B4J293 547 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SAGE2PA6NJ88 616 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 PTTG1O95997 202 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 OPN1MWP04001 364 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ADH1AP07327 375 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 OPN1MW2P0DN77 364 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 OPN1MW3P0DN78 364 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CD8BP10966 210 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MAOBP27338 520 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ACADLP28330 430 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SSR2P43308 183 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 DEFA1P59665 94 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 DEFA3P59666 94 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ID2Q02363 134 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 PIP5KL1Q5T9C9 394 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 KRT73Q86Y46 540 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 OR8D4Q8NGM9 314 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 BBS10Q8TAM1 723 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 RNF31Q96EP0 1072 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MAPKAP1Q9BPZ7 522 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CSNK1G3Q9Y6M4 447 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MDC1Q14676 2089 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ISPDA4D126 451 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 FCMRO60667 390 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CLTBP09497 229 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ADRB3P13945 408 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 RFX3P48380 749 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 HMGA2P52926 109 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ATP12AP54707 1039 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SLC35F1Q5T1Q4 408 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 COQ10AQ96MF6 247 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF578Q96N58 590 aaPredicted RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MAN2C1Q9NTJ4 1040 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 CCDC59Q9P031 241 aaKnown RBP12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 SERGEFQ9UGK8 458 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MKLN1Q9UL63 735 aa12.44□□□□□ -0.42
KCNIP3-201ENST00000295225 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 PMS2P1A4D2B8 440 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 FOXE1O00358 373 aaPredicted RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 GPR171O14626 319 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 DNAJB6O75190 326 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 CNOT4O95628 575 aaKnown RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 TSPAN19P0C672 248 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 PRG2P13727 222 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 HK1P19367 917 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 RORCP51449 518 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 DCDC1P59894 354 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 FUT5Q11128 374 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 CHAF1BQ13112 559 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 LARS2Q15031 903 aaKnown RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF658BQ4V348 819 aaPredicted RBP12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 WDR73Q6P4I2 378 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 ZNF227Q86WZ6 799 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 CRELD1Q96HD1 420 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 OR52A5Q9H2C5 316 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 NKIRAS2Q9NYR9 191 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 ATG4BQ9Y4P1 393 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 DMDP11532 3685 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 IGKV1-8A0A0C4DH67 115 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 TXNL1O43396 289 aa12.43□□□□□ -0.42
KCNIP3-201ENST00000295225 HPGDSO60760 199 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms