RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 DEAF1O75398 565 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 OR2J2O76002 312 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 NADKO95544 446 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 DBIP07108 87 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 FESP07332 822 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 IL7RP16871 459 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 IL12BP29460 328 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 LCN1P31025 176 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 PNLIPRP2P54317 469 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 VLDLRP98155 873 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 CHAF1BQ13112 559 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 MAPK14Q16539 360 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 IQCCQ4KMZ1 466 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 DCAF10Q5QP82 559 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 VRK2Q86Y07 508 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 ZDHHC21Q8IVQ6 265 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 ARMC10Q8N2F6 343 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 GPR32P1Q8NGA4 272 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 FER1L6-AS2Q96M78 137 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 ADOQ96SZ5 270 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 PINK1Q9BXM7 581 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 VCX3BQ9H321 246 aa17.42■□□□□ 0.38
PDLIM3-202ENST00000284770 SPTBN2O15020 2390 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 NPIPA5A0A0B4J1W7 369 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 NPIPA7E9PJI5 369 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 NPIPB9F8W1W9 429 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF354AO60765 605 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 THBS1P07996 1170 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 NPIPA8P0DM63 369 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 PRKAR1BP31321 381 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 DCTP40126 519 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP12AP54707 1039 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 LARS2Q15031 903 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF141Q15928 474 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 GRAMD1BQ3KR37 738 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 PIWIL3Q7Z3Z3 882 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 EPHX4Q8IUS5 362 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 SLC15A4Q8N697 577 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF248Q8NDW4 579 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 SLC22A8Q8TCC7 542 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 KCNE4Q8WWG9 221 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 THAP4Q8WY91 577 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 NAF1Q96HR8 494 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF354BQ96LW1 612 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 HOXD1Q9GZZ0 328 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 DNAJB9Q9UBS3 223 aa17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF443Q9Y2A4 671 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-202ENST00000284770 CENPVL1A0A0U1RR11 272 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CST1P01037 141 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 FABP3P05413 133 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 NAGAP17050 411 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 IFI44LQ53G44 452 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 H3F3CQ6NXT2 135 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 DHRS4L2Q6PKH6 230 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 IZUMO2Q6UXV1 221 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 TSEN54Q7Z6J9 526 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 RPS19BP1Q86WX3 136 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 SLC5A8Q8N695 610 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ICA1LQ8NDH6 482 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CATSPER1Q8NEC5 780 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 OR4C3Q8NH37 302 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 APOBEC4Q8WW27 367 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 OIT3Q8WWZ8 545 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 PROX1Q92786 737 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 EME1Q96AY2 570 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CIB1Q99828 191 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 BDH2Q9BUT1 245 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP13A2Q9NQ11 1180 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 UBQLN4Q9NRR5 601 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ABCG2Q9UNQ0 655 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 SH3GLB1Q9Y371 365 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 DTNAQ9Y4J8 743 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 LRRC42Q9Y546 428 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 PRAMEF25A6NGN4 478 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 OR6C70A6NIJ9 312 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 NKX2-8O15522 239 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 TLX3O43711 291 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ITGA10O75578 1167 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 PPM1BO75688 479 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 NID1P14543 1247 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF26P17031 533 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 WT1P19544 449 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 AIMP2Q13155 320 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 LIN52Q52LA3 116 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CRTC2Q53ET0 693 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 PDZK1Q5T2W1 519 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP1A1-AS1Q5TC04 95 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 JMJD6Q6NYC1 403 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 GEMIN6Q8WXD5 167 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 RASL10BQ96S79 203 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 DPH1Q9BZG8 443 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CDCP1Q9H5V8 836 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 ZBTB20Q9HC78 741 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CNOT11Q9UKZ1 510 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 CHST2Q9Y4C5 530 aa17.4■□□□□ 0.38
PDLIM3-202ENST00000284770 SYT5O00445 386 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 ABCB7O75027 752 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 UTS2O95399 124 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 EPPINO95925 133 aa17.39■□□□□ 0.37
PDLIM3-202ENST00000284770 LGI1O95970 557 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms