RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Slc23a3Q60850 611 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 CmahQ61419 577 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 MafkQ61827 156 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 MroQ7TNB4 248 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Clstn3Q99JH7 956 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1156A2AVC3 323 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mllt10O54826 1068 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hsd17b12O70503 312 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ssr4Q62186 172 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Plpp3Q99JY8 312 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Lingo1Q9D1T0 614 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Creb3l4Q9D2A5 370 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Robo3Q9Z2I4 1366 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ccr1l1P51676 356 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tarbp2P97473 365 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Klhdc9Q3USL1 350 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ckmt2Q6P8J7 419 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pithd1Q8BWR2 211 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Poglut1Q8BYB9 392 aaKnown RBP15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SptssaQ8R207 71 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr339Q8VGK8 309 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ramp2Q9WUP0 189 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm4950D3YUM8 205 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pbx2O35984 430 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 NelfeP19426 375 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 AregP31955 248 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Id2P41136 134 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tm4sf1Q64302 202 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Crtc1Q68ED7 630 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ptgr1Q91YR9 329 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 B9d1Q9R1S0 204 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nfkb2Q9WTK5 899 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SnnP61807 88 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Txn2P97493 166 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pgap1Q3UUQ7 922 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Il10raQ61727 575 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Trnp1Q80ZI1 223 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SargQ8BI29 606 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 MallQ91X49 154 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 GmfgQ9ERL7 142 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kcnj16Q9Z307 419 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tm9sf2P58021 662 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr290Q7TS13 315 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 BtdQ8CIF4 520 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr450Q8VF81 310 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cox4i2Q91W29 172 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Scn9aQ62205 1984 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kmt2eQ3UG20 1868 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Catsperg1E9Q355 1151 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Thoc6Q5U4D9 341 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Klra4Q60651 263 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab40bQ8VHP8 278 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1112A2ATA0 318 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hoxc13P50207 328 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rap1aP62835 184 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Abhd4Q8VD66 342 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hrh4Q91ZY2 391 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rap1bQ99JI6 184 aa15.79■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Socs2O35717 198 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fam210aQ8BGY7 273 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Zfp763Q8BIC7 588 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cacng6Q8VHW3 260 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Toe1Q9D2E2 511 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cldn7Q9Z261 211 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nup214Q80U93 2085 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm8765B7ZWJ3 1017 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rdh5O55240 318 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm906Q3V0M1 1017 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr834Q7TRG8 312 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rbm11Q80YT9 238 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Peli2Q8BST6 419 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pramef8Q8CE24 480 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1277Q8VF41 303 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr441Q8VFS5 310 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fam69bQ99ML4 431 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gng13Q9JMF3 67 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 ApipQ9WVQ5 241 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Il20rbE9Q9A6 308 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 En1P09065 401 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc25a44Q8BGF9 314 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 NagpaQ8BJ48 517 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PcgF3Q8BTQ0 241 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ankrd33Q8BXP5 385 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nqo2Q9JI75 231 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sypl1O09117 261 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hdac3O88895 424 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cyp8b1O88962 500 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm1123Q1RME4 390 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pld6Q5SWZ9 221 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Esco2Q8CIB9 592 aaKnown RBP15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Zfyve21Q8VCM3 234 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Atg5Q99J83 275 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rnf111Q99ML9 989 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kdelr2Q9CQM2 212 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mocs2Q9Z223 189 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PfkmP47857 780 aaKnown RBP15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cyb5aP56395 134 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gch1Q05915 241 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gpr19Q61121 415 aa15.78■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pnma8aQ80VM8 430 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms