RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 EXTL2Q9UBQ6 330 aa1.86□□□□□ -2.11
TARDBP-220ENST00000618606 BCAP29Q9UHQ4 241 aa1.86□□□□□ -2.11
TARDBP-220ENST00000618606 SMC3Q9UQE7 1217 aa1.86□□□□□ -2.11
TARDBP-220ENST00000618606 CHMP2BQ9UQN3 213 aa1.86□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF175Q9Y473 711 aa1.86□□□□□ -2.11
TARDBP-220ENST00000618606 SF3B1O75533 1304 aaKnown RBP eCLIP1.86□□□□□ -2.11
TARDBP-220ENST00000618606 CFAP65Q6ZU64 1925 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TRAV9-2A0A087WT02 112 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 LOC390937A0A1W2PQ73 354 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 GSAPA4D1B5 854 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OR5H15A6NDH6 313 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ZSCAN5BA6NJL1 495 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TCP10L2B9ZVM9 353 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 UBXN8O00124 270 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 AP3B1O00203 1094 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 KIAA0513O60268 411 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TSC22D2O75157 780 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PALMO75781 387 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 IDH1O75874 414 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 FGF19O95750 216 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OPN1MWP04001 364 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 APRTP07741 180 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TPM2P07951 284 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 GSTT2P0CG29 244 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 GSTT2BP0CG30 244 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OPN1MW2P0DN77 364 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OPN1MW3P0DN78 364 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PCMT1P22061 227 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 UQCRC2P22695 453 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PTPN6P29350 595 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 RFC2P35250 354 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 HTR5AP47898 357 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TDO2P48775 406 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 NUMBP49757 651 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 RGS4P49798 205 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 SGSHP51688 502 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ERVPABLB-1P60509 514 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 SPIBQ01892 262 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 EXOSC2Q13868 293 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CAMK4Q16566 473 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PCK2Q16822 640 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 LRIT3Q3SXY7 679 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CFAP157Q5JU67 520 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PMF1Q6P1K2 205 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ARMCX5Q6P1M9 558 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 NIPAL3Q6P499 406 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 DPY19L2P2Q6ZN68 376 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 C17orf64Q86WR6 236 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CBWD2Q8IUF1 395 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 EFCAB13Q8IY85 973 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF679Q8IYX0 411 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 MLKLQ8NB16 471 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 COLGALT1Q8NBJ5 622 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CHDHQ8NE62 594 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 STEAP2Q8NFT2 490 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OR4F17Q8NGA8 305 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OR8J1Q8NGP2 316 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OR4F5Q8NH21 305 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 WDR36Q8NI36 951 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 C8orf46Q8TAG6 207 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 RPL3LQ92901 407 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PNPLA2Q96AD5 504 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TCEANC2Q96MN5 208 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CASD1Q96PB1 797 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 VPS35Q96QK1 796 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PSKH2Q96QS6 385 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 OR4F4Q96R69 305 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 TNFRSF13CQ96RJ3 184 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 SECISBP2Q96T21 854 aaKnown RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 HSD17B14Q9BPX1 270 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 FAM124BQ9H5Z6 455 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 KCNK13Q9HB14 408 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PLEKHA3Q9HB20 300 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 RAB18Q9NP72 206 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 UBE2TQ9NPD8 197 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PLSCR3Q9NRY6 295 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 STARD5Q9NSY2 213 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 AGPAT5Q9NUQ2 364 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ARMCX1Q9P291 453 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ATP6V1HQ9UI12 483 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 ZNF490Q9ULM2 529 aaPredicted RBP1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CLEC4AQ9UMR7 237 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 CPQQ9Y646 472 aa1.85□□□□□ -2.11
TARDBP-220ENST00000618606 PTPRUQ92729 1446 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 CUX2O14529 1486 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 TEX48A0A1B0GUV7 120 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 LRRC30A6NM36 301 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 MEI4A8MW99 385 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 RSPH10B2B2RC85 870 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 NPIPA2E9PIF3 369 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 IMPA2O14732 288 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 ARPC1BO15143 372 aaKnown RBP1.84□□□□□ -2.11
TARDBP-220ENST00000618606 MAGEB3O15480 346 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 TBX19O60806 448 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 SURF6O75683 361 aaKnown RBP1.84□□□□□ -2.11
TARDBP-220ENST00000618606 STK17BO94768 372 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 KIAA0754O94854 1291 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 NDUFA7O95182 113 aa1.84□□□□□ -2.11
TARDBP-220ENST00000618606 CHRNA1P02708 482 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms