RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SEMG1P04279 462 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 PRKAR1AP10644 381 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 GPX2P18283 190 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 VLDLRP98155 873 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 HOXC5Q00444 222 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 CHIT1Q13231 466 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 C1orf61Q13536 156 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 PRRT3Q5FWE3 981 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
FOXN3-219ENST00000615335 PRAMEF9Q5VWM5 478 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 EIF3MQ7L2H7 374 aaKnown RBP12.28□□□□□ -0.44
FOXN3-219ENST00000615335 VTCN1Q7Z7D3 282 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 LUZP2Q86TE4 346 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 SLC37A3Q8NCC5 494 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
FOXN3-219ENST00000615335 SLC9A6Q92581 669 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 HSH2DQ96JZ2 352 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 ZC3H10Q96K80 434 aaKnown RBP12.28□□□□□ -0.44
FOXN3-219ENST00000615335 PITX2Q99697 317 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 MARVELD1Q9BSK0 173 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 GSDMCQ9BYG8 508 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 KRT84Q9NSB2 600 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
FOXN3-219ENST00000615335 FRYLO94915 3013 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 WDR87Q6ZQQ6 2873 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 A0A1B0GVT2 93 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 A0A1W2PPL8 197 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PRR19A6NJB7 356 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 OR52A4PA6NMU1 304 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PLA2G10O15496 165 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PRMT3O60678 531 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 WBP4O75554 376 aaKnown RBP12.27□□□□□ -0.44
FOXN3-219ENST00000615335 COX7A2P14406 83 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 JUPP14923 745 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 UGT8Q16880 541 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 UAP1L1Q3KQV9 507 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 CCSMST1Q4G0I0 132 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 FLYWCH1Q4VC44 716 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 SOWAHCQ53LP3 525 aaPredicted RBP12.27□□□□□ -0.44
FOXN3-219ENST00000615335 BICRALQ6AI39 1079 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 UNC5DQ6UXZ4 953 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 RTL4Q6ZR62 310 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 CBLL1Q75N03 491 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 TAF8Q7Z7C8 310 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 NRROSQ86YC3 692 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PTOV1Q86YD1 416 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 RNF175Q8N4F7 328 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 LRRC17Q8N6Y2 441 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 ATG16L2Q8NAA4 619 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 OR5AR1Q8NGP9 310 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 FCRL1Q96LA6 429 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 INSM2Q96T92 566 aaPredicted RBP12.27□□□□□ -0.44
FOXN3-219ENST00000615335 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.44
FOXN3-219ENST00000615335 ATG10Q9H0Y0 220 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 REEP1Q9H902 201 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 SUSD2Q9UGT4 822 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PILRBQ9UKJ0 227 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.44
FOXN3-219ENST00000615335 KMT2EQ8IZD2 1858 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 MFSD2BA6NFX1 497 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 HLA-DQB1P01920 261 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 RPN2P04844 631 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 CELA2BP08218 269 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-219ENST00000615335 NME1P15531 152 aaKnown RBP12.27□□□□□ -0.45
FOXN3-219ENST00000615335 ARHGDIBP52566 201 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 WNT3P56703 355 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 FGFBP1Q14512 234 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 KRT33BQ14525 404 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 LPAL2Q16609 132 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 GDPGP1Q6ZNW5 385 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 LAX1Q8IWV1 398 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 GPBAR1Q8TDU6 330 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 DPH2Q9BQC3 489 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-219ENST00000615335 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 SYNDIG1Q9H7V2 258 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 FAM120CQ9NX05 1096 aaKnown RBP12.27□□□□□ -0.45
FOXN3-219ENST00000615335 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
FOXN3-219ENST00000615335 TP53BP1Q12888 1972 aaPredicted RBP12.26□□□□□ -0.45
FOXN3-219ENST00000615335 TNRC6BQ9UPQ9 1833 aaKnown RBP12.26□□□□□ -0.45
FOXN3-219ENST00000615335 TRAV20A0A0B4J274 112 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 PRR33A8MZF0 331 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 SCN2BO60939 215 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 EML2O95834 649 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 IRF8Q02556 426 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 CSTF3Q12996 717 aaKnown RBP12.26□□□□□ -0.45
FOXN3-219ENST00000615335 C19orf18Q8NEA5 215 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 OR5K2Q8NHB8 316 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 DPCDQ9BVM2 203 aaPredicted RBP12.26□□□□□ -0.45
FOXN3-219ENST00000615335 THUMPD1Q9NXG2 353 aaKnown RBP12.26□□□□□ -0.45
FOXN3-219ENST00000615335 STUB1Q9UNE7 303 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 ASB4Q9Y574 426 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 CABIN1Q9Y6J0 2220 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 CUL9Q8IWT3 2517 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 TRBV23OR9-2A0A075B6M9 112 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 FAM240BA0A1B0GVZ2 78 aa12.26□□□□□ -0.45
FOXN3-219ENST00000615335 FABP12A6NFH5 140 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms