RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 PSMB1P20618 241 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 TYK2P29597 1187 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 LCN1P31025 176 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 EVI2BP34910 448 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 THBS2P35442 1172 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 SOX18P35713 384 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 PTGDSP41222 190 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 ALDH9A1P49189 494 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 EMDP50402 254 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CLDN15P56746 228 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 DSCR9P59020 149 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 C17orf67Q0P5P2 114 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 MGAT2Q10469 447 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CSTF3Q12996 717 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 EXOSC7Q15024 291 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 PON3Q15166 354 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 NRF1Q16656 503 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CLEC12BQ2HXU8 276 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 SPIN4Q56A73 249 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 VWA1Q6PCB0 445 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 FAM111BQ6SJ93 734 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CMC1Q7Z7K0 106 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 FAM9CQ8IZT9 166 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 RNF175Q8N4F7 328 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 METTL25Q8N6Q8 603 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 FADS6Q8N9I5 356 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 UHMK1Q8TAS1 419 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 FNDC9Q8TBE3 224 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 DOK4Q8TEW6 326 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 RNF138Q8WVD3 245 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 SELENOMQ8WWX9 145 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 IGFBPL1Q8WX77 278 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 HSD17B8Q92506 261 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 NXNL1Q96CM4 212 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 ZC3HAV1LQ96H79 300 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 RADILQ96JH8 1075 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 MARK4Q96L34 752 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 HS6ST2Q96MM7 605 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 VSTM2LQ96N03 204 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 TMEM204Q9BSN7 226 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 MRPL1Q9BYD6 325 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 TBL1XR1Q9BZK7 514 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 GRIP2Q9C0E4 1043 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 RAB17Q9H0T7 212 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 NOL11Q9H8H0 719 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 ZBTB26Q9HCK0 441 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 CPSF2Q9P2I0 782 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 VPS29Q9UBQ0 182 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 MCM8Q9UJA3 840 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 FBXL2Q9UKC9 423 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 GRID1Q9ULK0 1009 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 SNX24Q9Y343 169 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 UTP11Q9Y3A2 253 aaKnown RBP5.66□□□□□ -1.5
CUX1-220ENST00000607092 RNF115Q9Y4L5 304 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 NCKAP5O14513 1909 aa5.66□□□□□ -1.5
CUX1-220ENST00000607092 PLCE1Q9P212 2302 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 A0A087WV62 115 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 A0A1W2PP18 115 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 GNG14A0A1W2PPG7 69 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 OR2M5A3KFT3 312 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 GJE1A6NN92 205 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 WASHC1A8K0Z3 465 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 A8MV72 311 aaPredicted RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 CXorf49A8MYA2 514 aaPredicted RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 SEC14L5O43304 696 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 KLF4O43474 513 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 SS18L1O75177 396 aaPredicted RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 URI1O94763 535 aaPredicted RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 SOX30O94993 753 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 KCNH1O95259 989 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 HSPA4LO95757 839 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 C2P06681 752 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 CD3EP07766 207 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 FAM157CP0CG43 387 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 CT45A8P0DMV1 189 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 CT45A9P0DMV2 189 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 PCSK2P16519 638 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 DDX5P17844 614 aaKnown RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 IL32P24001 234 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 CCKARP32238 428 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 EIF1P41567 113 aaKnown RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 B3GALT5-AS1P59052 145 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ACSM2AQ08AH3 577 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ZNF155Q12901 538 aaPredicted RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 TNK1Q13470 666 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 P2RY6Q15077 328 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 RASA2Q15283 850 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 RNPS1Q15287 305 aaKnown RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 EXOC3L2Q2M3D2 409 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 TRMT12Q53H54 448 aaKnown RBP5.65□□□□□ -1.5
CUX1-220ENST00000607092 CT45A2Q5DJT8 189 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ZNF628Q5EBL2 1059 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 COX20Q5RI15 118 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ACSM2BQ68CK6 577 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 OR5M10Q6IEU7 315 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ESPNLQ6ZVH7 1005 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 ZNF550Q7Z398 422 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 CREG2Q8IUH2 290 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 MISPQ8IVT2 679 aa5.65□□□□□ -1.5
CUX1-220ENST00000607092 SLC44A2Q8IWA5 706 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms