RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MKLN1Q9UL63 735 aa12.71□□□□□ -0.37
IRF3-229ENST00000601373 GPR55Q9Y2T6 319 aaPredicted RBP12.71□□□□□ -0.37
IRF3-229ENST00000601373 CCDC187A0A096LP49 1063 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 GXYLT2A0PJZ3 443 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 C7orf72A4D263 438 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 PRAMEF25A6NGN4 478 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 PCDH17O14917 1159 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CSO75390 466 aaKnown RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 DIRAS1O95057 198 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 ZIC2O95409 532 aaPredicted RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 JMJD7P0C870 316 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CT45A8P0DMV1 189 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CT45A9P0DMV2 189 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 ZNF28P17035 718 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 DRD5P21918 477 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 RPS4Y1P22090 263 aaKnown RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 SLC5A2P31639 672 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 IFNA8P32881 189 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 PIGAP37287 484 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 EFNA3P52797 238 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 IST1P53990 364 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 SPIBQ01892 262 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 LIN52Q52LA3 116 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CT45A2Q5DJT8 189 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CCNJQ5T5M9 372 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 TBPL2Q6SJ96 375 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 ANKRD37Q7Z713 158 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 VRK2Q86Y07 508 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 OR1N1Q8NGS0 311 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 GATA6Q92908 595 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 RMND5BQ96G75 393 aaPredicted RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 SOX17Q9H6I2 414 aaPredicted RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 VNN3Q9NY84 501 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 C3orf18Q9UK00 162 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 CBLCQ9ULV8 474 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 ZNF443Q9Y2A4 671 aaPredicted RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 OR10H1Q9Y4A9 318 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 AP4B1Q9Y6B7 739 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 AK5Q9Y6K8 562 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 U3KQV3 271 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
IRF3-229ENST00000601373 COL27A1Q8IZC6 1860 aaPredicted RBP12.7□□□□□ -0.38
IRF3-229ENST00000601373 PKD1L2Q7Z442 2459 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 FRG2CA6NGY1 282 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 GADD45GO95257 159 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ALPLP05186 524 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 LCN1P31025 176 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 RAD23AP54725 363 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 PPP2R2BQ00005 443 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 DECR1Q16698 335 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.69□□□□□ -0.38
IRF3-229ENST00000601373 FLYWCH1Q4VC44 716 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 NHSL2Q5HYW2 709 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 COLEC12Q5KU26 742 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 TMEM164Q5U3C3 297 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 RNF220Q5VTB9 566 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 TMEM205Q6UW68 189 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 NPSR1Q6W5P4 371 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ZNF517Q6ZMY9 492 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 SLC29A4Q7RTT9 530 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 TMEM179BQ7Z7N9 219 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 DHRSXQ8N5I4 330 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 PIK3C3Q8NEB9 887 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 VANGL1Q8TAA9 524 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 GIPC3Q8TF64 312 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ZG16BQ96DA0 208 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 LCORQ96JN0 433 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 NR1H4Q96RI1 486 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 SPSB2Q99619 263 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 CRB3Q9BUF7 120 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 NUDT9Q9BW91 350 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 HOXD1Q9GZZ0 328 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 QRSL1Q9H0R6 528 aaKnown RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 PDP1Q9P0J1 537 aaPredicted RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ACAD8Q9UKU7 415 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 PPIEQ9UNP9 301 aaKnown RBP12.69□□□□□ -0.38
IRF3-229ENST00000601373 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 PCDHGA3Q9Y5H0 932 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 LYVE1Q9Y5Y7 322 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 B3GALT1Q9Y5Z6 326 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
IRF3-229ENST00000601373 C2orf92A0A1B0GVN3 265 aa12.68□□□□□ -0.38
IRF3-229ENST00000601373 SAGE2PA6NJ88 616 aa12.68□□□□□ -0.38
IRF3-229ENST00000601373 PLD2O14939 933 aa12.68□□□□□ -0.38
IRF3-229ENST00000601373 UGT2B17O75795 530 aa12.68□□□□□ -0.38
IRF3-229ENST00000601373 IGHEP01854 428 aa12.68□□□□□ -0.38
IRF3-229ENST00000601373 CCNYL3P0C7X3 344 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms