RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FLCNQ8NFG4 579 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 FAM3CQ92520 227 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 RFKQ969G6 155 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 TRMT61AQ96FX7 289 aaKnown RBP15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 NELL2Q99435 816 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 SDF2Q99470 211 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 SLC30A2Q9BRI3 323 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 PIGUQ9H490 435 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 SPIN1Q9Y657 262 aaPredicted RBP15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 HS3ST3A1Q9Y663 406 aa15.46■□□□□ 0.07
PRKCSH-217ENST00000592741 FAM221BA6H8Z2 402 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 PIP5K1CO60331 668 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 THY1P04216 161 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 EEF1A1P68104 462 aaKnown RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 COL9A2Q14055 689 aaPredicted RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 GPR68Q15743 365 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 TRMT12Q53H54 448 aaKnown RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 FHL5Q5TD97 284 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 LAPTM4BQ86VI4 370 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 ZNF619Q8N2I2 560 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 BAHD1Q8TBE0 780 aaPredicted RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 TMEM255BQ8WV15 326 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 HTRA1Q92743 480 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 ZNF350Q9GZX5 532 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 C8orf33Q9H7E9 229 aaPredicted RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 ADAP2Q9NPF8 381 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 ISYNA1Q9NPH2 558 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 SNTG1Q9NSN8 517 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 TMEM74BQ9NUR3 256 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 MED17Q9NVC6 651 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 NLGN3Q9NZ94 848 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 CPNE7Q9UBL6 633 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 SLC7A7Q9UM01 511 aa15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 MRPS2Q9Y399 296 aaKnown RBP15.46■□□□□ 0.06
PRKCSH-217ENST00000592741 STK25O00506 426 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 KLF4O43474 513 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 APOL3O95236 402 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 DLGAP3O95886 979 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 PVRP15151 417 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 NT5EP21589 574 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 CDH11P55287 796 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 DEFA1P59665 94 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 DEFA3P59666 94 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 BNC1Q01954 994 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 TFF2Q03403 129 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 RUNX1T1Q06455 604 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 PGGHGQ32M88 737 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 DCST2Q5T1A1 773 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 CCNJQ5T5M9 372 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 SLC30A6Q6NXT4 461 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 ZNF620Q6ZNG0 422 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 RNF44Q7L0R7 432 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 OR4Q3Q8NH05 313 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 PATE1Q8WXA2 126 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 CCDC32Q9BV29 185 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 EVA1BQ9NVM1 165 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 IL20Q9NYY1 176 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 CDH10Q9Y6N8 788 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 LRP4O75096 1905 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 REV3LO60673 3130 aa15.45■□□□□ 0.06
PRKCSH-217ENST00000592741 A0A087WV62 115 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 A0A0J9YY10 115 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 SURF4O15260 269 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 STX11O75558 287 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 SEMA4FO95754 770 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 ATP1B1P05026 303 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 DBIP07108 87 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 RABIFP47224 123 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 MANEAQ5SRI9 462 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 GALNT12Q8IXK2 581 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 TMEFF1Q8IYR6 380 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 DNAJC5GQ8N7S2 189 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 CDRT4Q8N9R6 151 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 ZBTB8BQ8NAP8 495 aaPredicted RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 GPBAR1Q8TDU6 330 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 UFD1Q92890 307 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 GSDMCQ9BYG8 508 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 BARHL1Q9BZE3 327 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 TXNL4BQ9NX01 149 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 CLDND1Q9NY35 253 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 SATB2Q9UPW6 733 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 COL4A2P08572 1712 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 MN1Q10571 1320 aaPredicted RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 RGS5O15539 181 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 FGF17O60258 216 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 LDB3O75112 727 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 CH25HO95992 272 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 GABRG2P18507 467 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 RPS4Y1P22090 263 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 TNFSF8P32971 234 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 SOX18P35713 384 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 LSSP48449 732 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 ZNF136P52737 540 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 COPZ1P61923 177 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 SHC2P98077 582 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 EXOSC6Q5RKV6 272 aaKnown RBP15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 OR2G6Q5TZ20 316 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 PRSS41Q7RTY9 318 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 CLDN22Q8N7P3 220 aa15.44■□□□□ 0.06
PRKCSH-217ENST00000592741 COX18Q8N8Q8 333 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms