RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 C3orf14Q9HBI5 128 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 PROK2Q9HC23 129 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ASIC5Q9NY37 505 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 KLRF1Q9NZS2 232 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 KLHL14Q9P2G3 628 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 MARCOQ9UEW3 520 aaPredicted RBP9.5□□□□□ -0.89
SDF2-208ENST00000589788 TINAGQ9UJW2 476 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 MAPRE3Q9UPY8 281 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ZNF835Q9Y2P0 537 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 CORINQ9Y5Q5 1042 aa9.5□□□□□ -0.89
SDF2-208ENST00000589788 ZNF407Q9C0G0 2248 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 A0A1W2PRB8 838 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 OR6C70A6NIJ9 312 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 TTC36A6NLP5 189 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 TRPC5OSA6NMA1 111 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 ZNF195O14628 629 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 HDAC3O15379 428 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 UGT2B11O75310 529 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 TRIM3O75382 744 aaPredicted RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 HTR3BO95264 441 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 TPOP07202 933 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 KITP10721 976 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 LAMP1P11279 417 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 G6PDP11413 515 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 LBPP18428 481 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 EFNA1P20827 205 aaPredicted RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 GDF1P27539 372 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 CASP3P42574 277 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 FRKP42685 505 aaPredicted RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 CDK9P50750 372 aaKnown RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 PRKAG1P54619 331 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 RAC1P63000 192 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 PTPN13Q12923 2485 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 EFR3AQ14156 821 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 PGS1Q32NB8 556 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 VPS26BQ4G0F5 336 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 NPSR1Q6W5P4 371 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 SPATA21Q7Z572 469 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 EID3Q8N140 333 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 KRTCAP2Q8N6L1 136 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 NATD1Q8N6N6 113 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 STON2Q8WXE9 905 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 HGDQ93099 445 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 SLC35A4Q96G79 324 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 OSBPL11Q9BXB4 747 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 DPY30Q9C005 99 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 FAM107BQ9H098 131 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 ZNF703Q9H7S9 590 aaPredicted RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 MEAF6Q9HAF1 191 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 Q9N2J8 555 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 EQTNQ9NQ60 294 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 MRTO4Q9UKD2 239 aaKnown RBP9.49□□□□□ -0.89
SDF2-208ENST00000589788 USH1CQ9Y6N9 552 aa9.49□□□□□ -0.89
SDF2-208ENST00000589788 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SPTBN1Q01082 2364 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 FLNBO75369 2602 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 TRGV5A0A0B4J1U4 118 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 A1L4Q6 167 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 WIPF3A6NGB9 483 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PRAMEF25A6NGN4 478 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 LRRC3CA6NJW4 275 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TMPRSS2O15393 492 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 CFLARO15519 480 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 EMC8O43402 210 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SUSD5O60279 629 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SNX3O60493 162 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TSPAN2O60636 221 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 ZG16O60844 167 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 DNAJA2O60884 412 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TRAPPC6AO75865 159 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PSMG1O95456 288 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 RNF224P0DH78 156 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 ELAVL4P26378 380 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 NTF4P34130 210 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 GABRA3P34903 492 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 RFX3P48380 749 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 MAN2A2P49641 1150 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PNLIPRP2P54317 469 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 DIO3P55073 304 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 CLDN8P56748 225 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PRR5P85299 388 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PSG6Q00889 435 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SNTA1Q13424 505 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 MLC1Q15049 377 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TOMM20Q15388 145 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 DECR1Q16698 335 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 LSM12Q3MHD2 195 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 SPDYE7PQ495Y7 208 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 CYP27C1Q4G0S4 372 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 GKAP1Q5VSY0 366 aaPredicted RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 SLC30A6Q6NXT4 461 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TMEM81Q6P7N7 255 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 ANGPTL8Q6UXH0 198 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 MAVSQ7Z434 540 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 WDR53Q7Z5U6 358 aaPredicted RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 FGD2Q7Z6J4 655 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PIGWQ7Z7B1 504 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 CD163Q86VB7 1156 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms