RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SPRED1Q7Z699 444 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CMC1Q7Z7K0 106 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RBM23Q86U06 439 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 LDB1Q86U70 411 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 MFSD6LQ8IWD5 586 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 BBS7Q8IWZ6 715 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 APCDD1Q8J025 514 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 UMODL1-AS1Q8N2C9 162 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 C1orf52Q8N6N3 182 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 C12orf76Q8N812 135 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 CLEC18CQ8NCF0 446 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PAPD5Q8NDF8 572 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 PDZD8Q8NEN9 1154 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PROKR2Q8NFJ6 384 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ABHD11Q8NFV4 315 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SHKBP1Q8TBC3 707 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ARRDC2Q8TBH0 407 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TCP10LQ8TDR4 215 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SH3RF2Q8TEC5 729 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GAB3Q8WWW8 586 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 OVCA2Q8WZ82 227 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GTF3AQ92664 365 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 GTF2H4Q92759 462 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 HOXB13Q92826 284 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 EMG1Q92979 244 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 PHF21AQ96BD5 680 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SPSB1Q96BD6 273 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PABPC5Q96DU9 382 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 TCTN2Q96GX1 697 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MAP6Q96JE9 813 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 LCORQ96JN0 433 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 LRRC3BQ96PB8 259 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 OR2A14Q96R47 310 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 FCRL5Q96RD9 977 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CPPED1Q9BRF8 314 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 NUDT22Q9BRQ3 303 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TMEM246Q9BRR3 403 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MECRQ9BV79 373 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SLC46A2Q9BY10 475 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MRPL13Q9BYD1 178 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 PITPNM3Q9BZ71 974 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRDM14Q9GZV8 571 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CDIP1Q9H305 208 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 FAM96AQ9H5X1 160 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 EPHX3Q9H6B9 360 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CAB39LQ9H9S4 337 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 YAE1D1Q9NRH1 226 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ZFP57Q9NU63 452 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SIDT1Q9NXL6 827 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 NCKIPSDQ9NZQ3 722 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 DNMT3BQ9UBC3 853 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 UPB1Q9UBR1 384 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CD207Q9UJ71 328 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ZFP69BQ9UJL9 534 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 C3orf18Q9UK00 162 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SORCS3Q9UPU3 1222 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ERVW-1Q9UQF0 538 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 FOXA2Q9Y261 457 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 RAXQ9Y2V3 346 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GRIP1Q9Y3R0 1128 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 NPTNQ9Y639 398 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 BPTFQ12830 3046 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 BRWD1Q9NSI6 2320 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SCN3AQ9NY46 2000 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TEX51A0A1B0GUA7 166 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 A0A1W2PNR3 127 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 NEMP2A6NFY4 417 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FAM90A8PA6NJQ4 464 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ZNF729A6NN14 1252 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 MARCH11A6NNE9 402 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ANKRD30BLA7E2S9 258 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MAGEB17A8MXT2 336 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TMEM114B3SHH9 223 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ANKRD66B4E2M5 251 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TMEM238C9JI98 176 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LEFTY2O00292 366 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CLDN4O14493 209 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TRIM24O15164 1050 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TM9SF1O15321 606 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DHHO43323 396 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PLRG1O43660 514 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 NRP2O60462 931 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MAGEC1O60732 1142 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CCDC22O60826 627 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 UPK3AO75631 287 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ZMPSTE24O75844 475 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RSL1D1O76021 490 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 WDR47O94967 919 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SNAP29O95721 258 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OXSR1O95747 527 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 CER1O95813 267 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MPIG6BO95866 241 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GLUD1P00367 558 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GHRHP01286 108 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 APOC1P02654 83 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ALDOAP04075 364 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 ATXN1LP0C7T5 689 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 ELFN1P0C7U0 828 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms