RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SPRY4Q9C004 299 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 REEP1Q9H902 201 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 KLHL28Q9NXS3 571 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 CENPVL1A0A0U1RR11 272 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 M0R3H8 397 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 SOCS2O14508 198 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 TM4SF5O14894 197 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 LGI1O95970 557 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 THBS1P07996 1170 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 DRD5P21918 477 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 RPS4Y1P22090 263 aaKnown RBP20.3■□□□□ 0.84
LINC01960-201ENST00000563759 GPR143P51810 404 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 AQP4P55087 323 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 NRF1Q16656 503 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 IQCCQ4KMZ1 466 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 EIPR1Q53HC9 387 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 DHRS4L2Q6PKH6 230 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 HSDL2Q6YN16 418 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 DEF8Q6ZN54 512 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 TSEN54Q7Z6J9 526 aaKnown RBP20.3■□□□□ 0.84
LINC01960-201ENST00000563759 COMTD1Q86VU5 262 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 ZDHHC13Q8IUH4 622 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 SEMA4CQ9C0C4 833 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 NRSN2Q9GZP1 204 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 ENPP4Q9Y6X5 453 aa20.3■□□□□ 0.84
LINC01960-201ENST00000563759 SYT5O00445 386 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 ADAMDEC1O15204 470 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 UGT2B17O75795 530 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 RRM2P31350 389 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 GABREP78334 506 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 PPP1R8Q12972 351 aaKnown RBP20.29■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF836Q6ZNA1 936 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 MARCH9Q86YJ5 346 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 NLGN4XQ8N0W4 816 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 SVOPLQ8N434 492 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF614Q8N883 585 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 ZSCAN1Q8NBB4 408 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 NLGN4YQ8NFZ3 816 aaPredicted RBP20.29■□□□□ 0.84
LINC01960-201ENST00000563759 LMF1Q96S06 567 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 VNN3Q9NY84 501 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 MRTO4Q9UKD2 239 aaKnown RBP20.29■□□□□ 0.84
LINC01960-201ENST00000563759 TCFL5Q9UL49 500 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 PPIEQ9UNP9 301 aaKnown RBP20.29■□□□□ 0.84
LINC01960-201ENST00000563759 SAMHD1Q9Y3Z3 626 aaKnown RBP20.29■□□□□ 0.84
LINC01960-201ENST00000563759 TESMINQ9Y4I5 508 aa20.29■□□□□ 0.84
LINC01960-201ENST00000563759 LOC102723996A0A087X1L8 192 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CDC14CA4D256 554 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 G3V2T6 193 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 PCDH17O14917 1159 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 DNAJB5O75953 348 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 EPPINO95925 133 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 GUSBP08236 651 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RAB40ALP0C0E4 278 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 NR0B1P51843 470 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 SLC26A5P58743 744 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RNF4P78317 190 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 SPIBQ01892 262 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 MAPK14Q16539 360 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 OTUD3Q5T2D3 398 aaPredicted RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 EFHD2Q96C19 240 aaPredicted RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 POLR1BQ9H9Y6 1135 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CNOT11Q9UKZ1 510 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 TRBV11-1A0A0K0K1C0 115 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 STMND1H3BQB6 276 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 J3KTA2 159 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 EI24O14681 340 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 NID1P14543 1247 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF26P17031 533 aaPredicted RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RHCEP18577 417 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 ARHGDIAP52565 204 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 PSMD4P55036 377 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RPS18P62269 152 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RPS15P62841 145 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 STK32CQ86UX6 486 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CYP4Z1Q86W10 505 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 LACC1Q8IV20 430 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 GALNT15Q8N3T1 639 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 OR4D11Q8NGI4 311 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 OR5K1Q8NHB7 308 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 PIP5K1AQ99755 562 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 SLC29A1Q99808 456 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 B3GNT4Q9C0J1 378 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 RLIMQ9NVW2 624 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 KCNE5Q9UJ90 142 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 ZNF223Q9UK11 482 aaPredicted RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
LINC01960-201ENST00000563759 C15orf41Q9Y2V0 281 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 PCDHGA10Q9Y5H3 936 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 HS3ST3B1Q9Y662 390 aa20.28■□□□□ 0.84
LINC01960-201ENST00000563759 CLDN24A6NM45 220 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 ACOX3O15254 700 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 RASAL1O95294 804 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 IGHEP01854 428 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 MMP11P24347 488 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 KRT20P35900 424 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 DCTP40126 519 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 PCOLCEQ15113 449 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 PDZK1Q5T2W1 519 aa20.27■□□□□ 0.84
LINC01960-201ENST00000563759 RBM45Q8IUH3 476 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms