RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 DCAF7P61962 342 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 BTG2P78543 158 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SPIBQ01892 262 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 ZFP36L1Q07352 338 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 FUT5Q11128 374 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 DUSP8Q13202 625 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF267Q14586 743 aaPredicted RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 EXOSC7Q15024 291 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 PDK3Q15120 406 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 MAPK11Q15759 364 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 DUSP7Q16829 419 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 IQCCQ4KMZ1 466 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 NKAIN1Q4KMZ8 207 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 LIN52Q52LA3 116 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 NHSL2Q5HYW2 709 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 COLEC12Q5KU26 742 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 TTC23Q5W5X9 447 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 AP1ARQ63HQ0 302 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 RBM44Q6ZP01 1051 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 NAXDQ8IW45 347 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF619Q8N2I2 560 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF555Q8NEP9 628 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 OR10Q1Q8NGQ4 319 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 PHF10Q8WUB8 498 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 APOBEC4Q8WW27 367 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SLC35A4Q96G79 324 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 LRFN5Q96NI6 719 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SLC46A1Q96NT5 459 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SDF2Q99470 211 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 CMKLR1Q99788 373 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 PSD2Q9BQI7 771 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 CNPPD1Q9BV87 410 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 EDEM2Q9BV94 578 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 POLR2J2Q9GZM3 115 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 POLR2J3Q9H1A7 115 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 OR10A5Q9H207 317 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SLC26A1Q9H2B4 701 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 SMOC1Q9H4F8 434 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 FOLH1BQ9HBA9 442 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 NECTIN3Q9NQS3 549 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 BATF3Q9NR55 127 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 FBXO8Q9NRD0 319 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 COPS7AQ9UBW8 275 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 MRTO4Q9UKD2 239 aaKnown RBP9.01□□□□□ -0.97
UBFD1-202ENST00000563366 TMCC3Q9ULS5 477 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 U3KQV3 271 aa9.01□□□□□ -0.97
UBFD1-202ENST00000563366 FER1L5A0AVI2 2057 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 PRAMEF27A3QJZ7 478 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 C7orf72A4D263 438 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OR6C76A6NM76 312 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 EFCAB7A8K855 629 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 C17orf105B2RV13 164 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 B4E171 279 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 WIPF1O43516 503 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 HS6ST1O60243 411 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 KIAA0513O60268 411 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 BRINP1O60477 761 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 UGT2B17O75795 530 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TNFAIP8O95379 198 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OXSR1O95747 527 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 KLK3P07288 261 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 IL7RP16871 459 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 S1PR1P21453 382 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 IGFBP5P24593 272 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 LCN1P31025 176 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TRHRP34981 398 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 TSPAN7P41732 249 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OR1E2P47887 323 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 EMDP50402 254 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 PGDP52209 483 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 CHN2P52757 468 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 HMGA2P52926 109 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 MC2RQ01718 297 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 RHAGQ02094 409 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 CHRNEQ04844 493 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 IL18R1Q13478 541 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ERV3-1Q14264 604 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 NSDHLQ15738 373 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 SLC36A3Q495N2 470 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 C6orf52Q5T4I8 152 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 RNF220Q5VTB9 566 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 C1orf189Q5VU69 101 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TYW3Q6IPR3 259 aaKnown RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 FRRS1Q6ZNA5 592 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OVCH1Q7RTY7 1134 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 RANBP3LQ86VV4 465 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 CARM1Q86X55 608 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TMEM151BQ8IW70 566 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 MORN4Q8NDC4 146 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 PLPP5Q8NEB5 264 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TOR1AIP2Q8NFQ8 470 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 GPR32P1Q8NGA4 272 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OR52P1PQ8NH57 321 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 GIPC3Q8TF64 312 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 METTL21AQ8WXB1 218 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 TFAP2CQ92754 450 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 SLC35B4Q969S0 331 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 OTUB1Q96FW1 271 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 RHOVQ96L33 236 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms