RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CDS1Q92903 461 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 SLCO4A1Q96BD0 722 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 VSTM2LQ96N03 204 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 UBL7Q96S82 380 aaPredicted RBP20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 TREX2Q9BQ50 279 aaPredicted RBP20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 ARMC1Q9NVT9 282 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 ADPRHL2Q9NX46 363 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 COPS7AQ9UBW8 275 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 V9GYQ6 96 aa20.75■□□□□ 0.91
SYNGR3-202ENST00000562045 PRKD3O94806 890 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 NKX2-2O95096 273 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 ZNF682O95780 498 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 AK1P00568 194 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 HOXB6P17509 224 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 SLC37A1P57057 533 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 SNCBQ16143 134 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 FAM98BQ52LJ0 330 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 GPAT3Q53EU6 434 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 TBCELQ5QJ74 424 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 RNF111Q6ZNA4 994 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 EIF3MQ7L2H7 374 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 GALNT10Q86SR1 603 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 COX18Q8N8Q8 333 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 GPR151Q8TDV0 419 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 ZNF721Q8TF20 911 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 ZNF607Q96SK3 696 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 BCL2L10Q9HD36 194 aa20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 PCDHGA9Q9Y5G4 932 aaKnown RBP20.74■□□□□ 0.91
SYNGR3-202ENST00000562045 A8MVJ9 347 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 M0QX08 132 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CLPSP04118 112 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ICAM2P13598 275 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ANPEPP15144 967 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 RPS26P11Q5JNZ5 115 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ENPP6Q6UWR7 440 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 PYURFQ96I23 114 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 SEPHS2Q99611 448 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 BTBD2Q9BX70 525 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 NKX1-2Q9UD57 310 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 TLN1Q9Y490 2541 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 A0A0G2JPF8 293 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 HNRNPCL2B2RXH8 293 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 HNRNPCL3B7ZW38 293 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ATXN7O15265 892 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 H6PDO95479 791 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 BAG2O95816 211 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 HNRNPCL4P0DMR1 293 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 RAP2AP10114 183 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CD97P48960 835 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CRYBA2P53672 197 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 PSG6Q00889 435 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CHRNB3Q05901 458 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ARHGAP11BQ3KRB8 267 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CYBRD1Q53TN4 286 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 LRRC74BQ6ZQY2 392 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 KRT73Q86Y46 540 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 FAM86B1Q8N7N1 296 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 PAPD5Q8NDF8 572 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 CHDHQ8NE62 594 aaPredicted RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 OR1N1Q8NGS0 311 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 LZICQ8WZA0 190 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 SMAD5Q99717 465 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 ADNPQ9H2P0 1102 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 MAGIXQ9H6Y5 334 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 RUBCNLQ9H714 662 aa20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 LIN28AQ9H9Z2 209 aaKnown RBP20.73■□□□□ 0.91
SYNGR3-202ENST00000562045 TRBV11-1A0A0K0K1C0 115 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 SUV39H1O43463 412 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 CHRM4P08173 479 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 ETS2P15036 469 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 GABRA3P34903 492 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 SLC34A1Q06495 639 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 H3F3CQ6NXT2 135 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 C16orf47Q6ZP98 133 aaPredicted RBP20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 LINC00696Q6ZRV3 163 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 C9orf43Q8TAL5 461 aaPredicted RBP20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 THAP3Q8WTV1 239 aaPredicted RBP20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 TAMM41Q96BW9 452 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 SLC47A1Q96FL8 570 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 Q9N2J8 555 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 TUBD1Q9UJT1 453 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 DTX4Q9Y2E6 619 aa20.72■□□□□ 0.91
SYNGR3-202ENST00000562045 HNRNPRO43390 633 aaKnown RBP20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 SERPINB7O75635 380 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 OPN1SWP03999 348 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 SELENOWP63302 87 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 POU6F2P78424 691 aaPredicted RBP20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 DCST2Q5T1A1 773 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 TCTN3Q6NUS6 607 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 RASSF5Q8WWW0 418 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 PIK3R3Q92569 461 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 WBP1Q96G27 269 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 SPATA5L1Q9BVQ7 753 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 YY1AP1Q9H869 796 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 CSAG2Q9Y5P2 127 aa20.71■□□□□ 0.91
SYNGR3-202ENST00000562045 TMEM200CA6NKL6 621 aa20.7■□□□□ 0.9
SYNGR3-202ENST00000562045 OR6C76A6NM76 312 aa20.7■□□□□ 0.9
SYNGR3-202ENST00000562045 COLEC12Q5KU26 742 aa20.7■□□□□ 0.9
SYNGR3-202ENST00000562045 AGAP7PQ5VUJ5 663 aa20.7■□□□□ 0.9
SYNGR3-202ENST00000562045 PQLC1Q8N2U9 271 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms