RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PSMD4P55036 377 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 DIO3P55073 304 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 PRR5P85299 388 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 OGFOD2Q6N063 350 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 MFSD12Q6NUT3 480 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 ZNF585AQ6P3V2 769 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 CCDC71Q8IV32 467 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 FAM83FQ8NEG4 500 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 FAM110BQ8TC76 370 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 NUDT8Q8WV74 236 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 TIMP4Q99727 224 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 NUF2Q9BZD4 464 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 OR2B2Q9GZK3 357 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 PRDM14Q9GZV8 571 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 FAM120CQ9NX05 1096 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 NKIRAS1Q9NYS0 192 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 KCNN3Q9UGI6 736 aa13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 MRPS18CQ9Y3D5 142 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-210ENST00000560383 C15orf38-AP3S2A0A0A6YYH1 394 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 GXYLT2A0PJZ3 443 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 NKX2-6A6NCS4 301 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 B4DXG7 233 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 KLF11O14901 512 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 ANKRD28O15084 1053 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 KCNH1O95259 989 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 GLI4P10075 376 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 ACP2P11117 423 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 EFNA1P20827 205 aaPredicted RBP13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 EVI2BP34910 448 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 LSM12Q3MHD2 195 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 EIPR1Q53HC9 387 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 C1orf185Q5T7R7 199 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 ATG16L1Q676U5 607 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 CDH24Q86UP0 819 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 SLC16A11Q8NCK7 471 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 MGARPQ8TDB4 240 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 ARL8AQ96BM9 186 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 PPP1R36Q96LQ0 422 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 DUSP26Q9BV47 211 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 UCK2Q9BZX2 261 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 EQTNQ9NQ60 294 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
SNRPA1-210ENST00000560383 AHRRA9YTQ3 701 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 SDHDO14521 159 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 HDAC3O15379 428 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 C6orf47O95873 294 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 ACTL6AO96019 429 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 IGKV1D-16P01601 117 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 NGFRP08138 427 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 BMP7P18075 431 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 LBPP18428 481 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 LCN1P31025 176 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 SRD5A2P31213 254 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 PRKAG1P54619 331 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 KRTAP10-9P60411 292 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 OCRLQ01968 901 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 DUSP5Q16690 384 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 SLC25A35Q3KQZ1 300 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 WIPI1Q5MNZ9 446 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 RIPPLY2Q5TAB7 128 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 YRDCQ86U90 279 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 PM20D2Q8IYS1 436 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 FADS6Q8N9I5 356 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 SFXN5Q8TD22 340 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 GPR151Q8TDV0 419 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 PIK3R3Q92569 461 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 DTNBP1Q96EV8 351 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 C16orf58Q96GQ5 468 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 STACQ99469 402 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 UGT2B28Q9BY64 529 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 CXorf36Q9H7Y0 433 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 DUSP22Q9NRW4 184 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 ZCCHC3Q9NUD5 404 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 FLRT3Q9NZU0 649 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 FBXL2Q9UKC9 423 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 SLC6A5Q9Y345 797 aa13.79□□□□□ -0.2
SNRPA1-210ENST00000560383 IGLV3-32A0A0A0MS00 114 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 A0A0G2JNJ9 132 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 SLCO1B7G3V0H7 640 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 SCN2BO60939 215 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 SOX30O94993 753 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 CCT3P49368 545 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 PRIM2P49643 509 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 GFRA1P56159 465 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 WNT3P56703 355 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 TESK1Q15569 626 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 SPNS3Q6ZMD2 512 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
SNRPA1-210ENST00000560383 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms