RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 UBE2FQ969M7 185 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PIGUQ9H490 435 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 MTHFD2LQ9H903 347 aaPredicted RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 TIMMDC1Q9NPL8 285 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PCDHGA10Q9Y5H3 936 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PTPRBP23467 1997 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PLOD3O60568 738 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 LDB3O75112 727 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 NT5EP21589 574 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 IFNA8P32881 189 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 ARL4DP49703 201 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 PIN1Q13526 163 aaPredicted RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 SEC23BQ15437 767 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 SMN1Q16637 294 aaKnown RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 PRTGQ2VWP7 1150 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 CDCP2Q5VXM1 449 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 SLC16A11Q8NCK7 471 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 OR5T3Q8NGG3 340 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 FAR1Q8WVX9 515 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 CDS1Q92903 461 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 MYDGFQ969H8 173 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 FKBP10Q96AY3 582 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 WFDC6Q9BQY6 131 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 ZNF768Q9H5H4 540 aaKnown RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 LIN28AQ9H9Z2 209 aaKnown RBP16.57■□□□□ 0.24
SNX1-208ENST00000559844 STARD5Q9NSY2 213 aa16.57■□□□□ 0.24
SNX1-208ENST00000559844 BLACEA4D250 179 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 TRIM64BA6NI03 449 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 SGK494L7N484 410 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ALOX5P09917 674 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ANKRD34CP0C6C1 535 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 CHMP24386 653 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 GSSP48637 474 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ID2Q02363 134 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ZFP36L1Q07352 338 aaKnown RBP16.56■□□□□ 0.24
SNX1-208ENST00000559844 FOXD4Q12950 439 aaPredicted RBP16.56■□□□□ 0.24
SNX1-208ENST00000559844 DEFB110Q30KQ9 67 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ARHGAP22Q7Z5H3 698 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ARHGEF39Q8N4T4 335 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 CDRT4Q8N9R6 151 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 OR52P1PQ8NH57 321 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ZNF226Q9NYT6 803 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 SEMA5BQ9P283 1151 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 WARS2Q9UGM6 360 aaKnown RBP16.56■□□□□ 0.24
SNX1-208ENST00000559844 PSORS1C1Q9UIG5 152 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 ZNF232Q9UNY5 417 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 SPTBP11277 2137 aa16.56■□□□□ 0.24
SNX1-208ENST00000559844 NME6O75414 186 aaPredicted RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 RDH16O75452 317 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 MT-CO3P00414 261 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 AK1P00568 194 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 MT-ND2P03891 347 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 ACP2P11117 423 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 GABRB1P18505 474 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 MLLT3P42568 568 aaPredicted RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 HSD11B2P80365 405 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 COX10Q12887 443 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 PRICKLE4Q2TBC4 344 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 TRMT12Q53H54 448 aaKnown RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 EXOSC6Q5RKV6 272 aaKnown RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 PGBD2Q6P3X8 592 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 PEX5LQ8IYB4 626 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 TMEM52Q8NDY8 209 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 SLC7A13Q8TCU3 470 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 STACQ99469 402 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 QRSL1Q9H0R6 528 aaKnown RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 DLL3Q9NYJ7 618 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 WDR45Q9Y484 360 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 FAM227AF5H4B4 570 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 HCRTR1O43613 425 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 SOX30O94993 753 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 ATE1O95260 518 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 CCNA2P20248 432 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 ALDH6A1Q02252 535 aaKnown RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 TRA2AQ13595 282 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■□□□ 12.9
SNX1-208ENST00000559844 KCNAB1Q14722 419 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 DUSP5Q16690 384 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 ISXQ2M1V0 245 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 PODNL1Q6PEZ8 512 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 CD300LDQ6UXZ3 194 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 AHSA2Q719I0 299 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 VRK2Q86Y07 508 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 KMT5CQ86Y97 462 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 OR9A4Q8NGU2 314 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 FCGR1BQ92637 280 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 SLC41A2Q96JW4 573 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 DEPDC7Q96QD5 511 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 BCL7BQ9BQE9 202 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 NAA50Q9GZZ1 169 aaKnown RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 ANKRD19PQ9H560 264 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
SNX1-208ENST00000559844 PDE7BQ9NP56 450 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 ADAP2Q9NPF8 381 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 DUSP22Q9NRW4 184 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 MAT2BQ9NZL9 334 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 REV1Q9UBZ9 1251 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 SATB2Q9UPW6 733 aa16.55■□□□□ 0.24
SNX1-208ENST00000559844 SH3D21A4FU49 640 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms