RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ATP12AP54707 1039 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 SOX8P57073 446 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 CHRNB3Q05901 458 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 PLCXD2Q0VAA5 305 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 ATP1A4Q13733 1029 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 EFR3AQ14156 821 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 LARS2Q15031 903 aaKnown RBP13.73□□□□□ -0.21
VPS18-202ENST00000558474 ZNF141Q15928 474 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 RPS26P11Q5JNZ5 115 aaPredicted RBP13.73□□□□□ -0.21
VPS18-202ENST00000558474 DCAF10Q5QP82 559 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 FIGNL1Q6PIW4 674 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 DHRS4L2Q6PKH6 230 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 CMIPQ8IY22 773 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 ADGRG5Q8IZF4 528 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 ZNF527Q8NB42 609 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 SLC35B4Q969S0 331 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 RASSF4Q9H2L5 321 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 HHATLQ9HCP6 504 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 S100A14Q9HCY8 104 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 ATP13A2Q9NQ11 1180 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 YARS2Q9Y2Z4 477 aaKnown RBP13.73□□□□□ -0.21
VPS18-202ENST00000558474 NPFFR2Q9Y5X5 522 aa13.73□□□□□ -0.21
VPS18-202ENST00000558474 NPIPB9F8W1W9 429 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 HNRNPRO43390 633 aaKnown RBP13.72□□□□□ -0.21
VPS18-202ENST00000558474 HS6ST1O60243 411 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 PPM1BO75688 479 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 PRKD3O94806 890 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 ZIC2O95409 532 aaPredicted RBP13.72□□□□□ -0.21
VPS18-202ENST00000558474 NADKO95544 446 aaPredicted RBP13.72□□□□□ -0.21
VPS18-202ENST00000558474 ZNF682O95780 498 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 FCGR1AP12314 374 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 IL7RP16871 459 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 CD247P20963 164 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 ADH7P40394 386 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 GPR68Q15743 365 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 LIN52Q52LA3 116 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 EIPR1Q53HC9 387 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 ZNF311Q5JNZ3 666 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 CCNJQ5T5M9 372 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 OPN5Q6U736 354 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 NUP54Q7Z3B4 507 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 RPS19BP1Q86WX3 136 aaKnown RBP13.72□□□□□ -0.21
VPS18-202ENST00000558474 CLEC1AQ8NC01 280 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 OR52P1PQ8NH57 321 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 CANT1Q8WVQ1 401 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 TTC9Q92623 222 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 TMBIM1Q969X1 311 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 OMA1Q96E52 524 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 UBQLN4Q9NRR5 601 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 PRDM4Q9UKN5 801 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
VPS18-202ENST00000558474 EXPH5Q8NEV8 1989 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 A0A1W2PQD3 144 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 TMEM229AB2RXF0 380 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 REM1O75628 298 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 UGT2B17O75795 530 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 SEMG1P04279 462 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 FESP07332 822 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 FBXO45P0C2W1 286 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 ITGAMP11215 1152 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 NID1P14543 1247 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 TBXA2RP21731 343 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 DCTP40126 519 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 MAGEA2P43356 314 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 MLF1P58340 268 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 KCNC4Q03721 635 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 NNATQ16517 81 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 IFI44LQ53G44 452 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 TCTN3Q6NUS6 607 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 FKBP9P1Q75LS8 142 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 PIWIL3Q7Z3Z3 882 aaKnown RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 VASH2Q86V25 355 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 GRAMD2AQ8IUY3 354 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 GPALPP1Q8IXQ4 340 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 PROX1Q92786 737 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 SLC47A1Q96FL8 570 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 HSH2DQ96JZ2 352 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 CCNL2Q96S94 520 aaPredicted RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 SECISBP2Q96T21 854 aaKnown RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 LHPPQ9H008 270 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 IL1RAPQ9NPH3 570 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 KLHL28Q9NXS3 571 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 TEKT2Q9UIF3 430 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 ABCG2Q9UNQ0 655 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 POLHQ9Y253 713 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 ZNF443Q9Y2A4 671 aaPredicted RBP13.71□□□□□ -0.21
VPS18-202ENST00000558474 PCSK5Q92824 1860 aa13.71□□□□□ -0.21
VPS18-202ENST00000558474 CFAP54Q96N23 3096 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 CDC14CA4D256 554 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 WWP2O00308 870 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 ITGA10O75578 1167 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms