RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 EHD1Q9H4M9 534 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 NT5DC2Q9H857 520 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 ZMAT3Q9HA38 289 aaKnown RBP8.21□□□□□ -1.1
NEDD1-211ENST00000557454 MS4A12Q9NXJ0 267 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 KLHL13Q9P2N7 655 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 PRSS50Q9UI38 385 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 KLHL21Q9UJP4 597 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 PCDHB14Q9Y5E9 798 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 HERC2O95714 4834 aa8.21□□□□□ -1.1
NEDD1-211ENST00000557454 ATP6V1G2-DDX39BF2Z307 99 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TNFSF11O14788 317 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 REM1O75628 298 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 IFNB1P01574 187 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 RNASE1P07998 156 aaKnown RBP8.2□□□□□ -1.1
NEDD1-211ENST00000557454 GNAZP19086 355 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 IGHV1-2P23083 117 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TLX1P31314 330 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SLC1A2P43004 574 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 GDF5P43026 501 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TSNAXIP1Q2TAA8 658 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF628Q5EBL2 1059 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 ASPHD2Q6ICH7 369 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 P2RY8Q86VZ1 359 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SYT14Q8NB59 555 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SRFBP1Q8NEF9 429 aaKnown RBP8.2□□□□□ -1.1
NEDD1-211ENST00000557454 OR7G1Q8NGA0 311 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SLC35B2Q8TB61 432 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 RNF128Q8TEB7 428 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 RNF138Q8WVD3 245 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 ATG4AQ8WYN0 398 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 C1GALT1C1Q96EU7 318 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 ADOQ96SZ5 270 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 C1QTNF6Q9BXI9 259 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 MS4A8Q9BY19 250 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TMPRSS13Q9BYE2 586 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TSPY26PQ9H489 355 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 FKRPQ9H9S5 495 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 G6PC2Q9NQR9 355 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 PAQR5Q9NXK6 330 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-211ENST00000557454 BFARQ9NZS9 450 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 PHF11Q9UIL8 331 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF490Q9ULM2 529 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SOX13Q9UN79 622 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 MMP24Q9Y5R2 645 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 SLC25A15Q9Y619 301 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
NEDD1-211ENST00000557454 TRAV20A0A0B4J274 112 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 SLC22A31A6NKX4 558 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 LYNX1G3V0Z9 82 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 AKR1B10O60218 316 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PRAMEF4O60810 478 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 RAD51DO75771 328 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 WDR47O94967 919 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PGM3O95394 542 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 LYNX1P0DP58 116 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 GAAP10253 952 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 NR2F6P10588 404 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ETS1P14921 441 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF17P17021 662 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 CD22P20273 847 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 COX5AP20674 150 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 S1PR1P21453 382 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 NT5EP21589 574 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 FPR2P25090 351 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 EDNRAP25101 427 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 CTNNA1P35221 906 aaKnown RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 IDH3GP51553 393 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PGGT1BP53609 377 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 WDR4P57081 412 aaKnown RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 DUSP2Q05923 314 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 RASGEF1BQ0VAM2 473 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ZP4Q12836 540 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 EXOSC7Q15024 291 aaKnown RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 TCEAL1Q15170 157 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 C18orf21Q32NC0 220 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PRAMEF9Q5VWM5 478 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 GTF2IRD2BQ6EKJ0 949 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 GTF2IRD2Q86UP8 949 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ZNF786Q8N393 782 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 KIR3DL3Q8N743 410 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 OR2V1Q8NHB1 315 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 NANPQ8TBE9 248 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 FAM110BQ8TC76 370 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 WDR60Q8WVS4 1066 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 TMIGD2Q96BF3 282 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 SLC35A4Q96G79 324 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PITHD1Q9GZP4 211 aaPredicted RBP8.19□□□□□ -1.1
NEDD1-211ENST00000557454 RAB1BQ9H0U4 201 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ANKZF1Q9H8Y5 726 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 ANO10Q9NW15 660 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 TREM2Q9NZC2 230 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 BCAP29Q9UHQ4 241 aa8.19□□□□□ -1.1
NEDD1-211ENST00000557454 TO15178 435 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms