RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 GAB1Q13480 694 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 NAE1Q13564 534 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CAMK1Q14012 370 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 GNA13Q14344 377 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 GBX1Q14549 363 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 UBXN2BQ14CS0 331 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 RGNQ15493 299 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 TSTQ16762 297 aaKnown RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 NDUFA9Q16795 377 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MICAQ29983 383 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 EXOC3L2Q2M3D2 409 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ZFP69Q49AA0 526 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 PDZK1Q5T2W1 519 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MLIPQ5VWP3 458 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MEDAGQ5VYS4 303 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 LAIR2Q6ISS4 152 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 GDPGP1Q6ZNW5 385 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SEM1Q6ZVN7 128 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 PTCHD4Q6ZW05 846 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CCDC80Q76M96 950 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 DSG4Q86SJ6 1040 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 PTOV1Q86YD1 416 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 BBS7Q8IWZ6 715 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SLC34A3Q8N130 599 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CYP4Z2PQ8N1L4 340 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 LNX2Q8N448 690 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 LINC00471Q8N535 108 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SLC5A8Q8N695 610 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 BOLLQ8N9W6 283 aaKnown RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 AQP11Q8NBQ7 271 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 FAM46DQ8NEK8 389 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 WDR20Q8TBZ3 569 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CAPSLQ8WWF8 208 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 EID2BQ96D98 161 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ECHDC3Q96DC8 303 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 OTUB1Q96FW1 271 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MCCC1Q96RQ3 725 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 FEVQ99581 238 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 P2RY13Q9BPV8 354 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 HEPHQ9BQS7 1158 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SLC30A2Q9BRI3 323 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CHCHD6Q9BRQ6 235 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CCM2Q9BSQ5 444 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 TEX101Q9BY14 249 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ALOXE3Q9BYJ1 711 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM245Q9H330 911 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 PRDM13Q9H4Q3 707 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM38AQ9H6F2 299 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 C3orf14Q9HBI5 128 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MYNNQ9NPC7 610 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 KRCC1Q9NPI7 259 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ITM2CQ9NQX7 267 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 POLE4Q9NR33 117 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ASAH2Q9NR71 780 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SLC6A13Q9NSD5 602 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 NPAP1Q9NZP6 1156 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 NFKBIL1Q9UBC1 381 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 DNMT3BQ9UBC3 853 aaKnown RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 P2RX2Q9UBL9 471 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ATP6V1HQ9UI12 483 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CD84Q9UIB8 345 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 SLC13A4Q9UKG4 626 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 MGAT4BQ9UQ53 548 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 HS3ST2Q9Y278 367 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 KLHL20Q9Y2M5 609 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CAB39Q9Y376 341 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 RPL36Q9Y3U8 105 aaKnown RBP4.14□□□□□ -1.75
ATXN3-241ENST00000556374 CMAHPQ9Y471 501 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 PCDHGA6Q9Y5G7 932 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 KLK4Q9Y5K2 254 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 ENPP4Q9Y6X5 453 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 C2orf16Q68DN1 1984 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 TTC3P53804 2025 aa4.14□□□□□ -1.75
ATXN3-241ENST00000556374 BPTFQ12830 3046 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OBSL1O75147 1896 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SMG1Q96Q15 3661 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TRBC2A0A5B9 178 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 C1orf226A1L170 272 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 OR2AG2A6NM03 316 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 AGAP14A8MT82 685 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 FAM25AB3EWG3 89 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 FAM25CB3EWG5 89 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 FAM25GB3EWG6 89 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 C2CD4DB7Z1M9 353 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 NEDD8-MDP1E9PL57 170 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TLR4O00206 839 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 PSMD11O00231 422 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CACNB4O00305 520 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 FOXE1O00358 373 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SLC30A4O14863 429 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ZW10O43264 779 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 TSPAN6O43657 245 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 KIAA0513O60268 411 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 MTX2O75431 263 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 WBP4O75554 376 aaKnown RBP4.13□□□□□ -1.75
ATXN3-241ENST00000556374 CCNKO75909 580 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 ABLIM3O94929 683 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 SNX4O95219 450 aa4.13□□□□□ -1.75
ATXN3-241ENST00000556374 RAB36O95755 333 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms