RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PQLC1Q8N2U9 271 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF441Q8N8Z8 693 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PAPD5Q8NDF8 572 aaKnown RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 OR52P1PQ8NH57 321 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SH3GL3Q99963 347 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SAP130Q9H0E3 1048 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 THSD1Q9NS62 852 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 RLIMQ9NVW2 624 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 FLRT3Q9NZU0 649 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 CHST2Q9Y4C5 530 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 KIAA0513O60268 411 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 UGT2B17O75795 530 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
SRP54-208ENST00000555557 AK1P00568 194 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 IGHEP01854 428 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 SEMG1P04279 462 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 IL7RP16871 459 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 CD82P27701 267 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 PUM1Q14671 1186 aaKnown RBP eCLIP9.42□□□□□ -0.9
SRP54-208ENST00000555557 RTP5Q14D33 572 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 LRRC36Q1X8D7 754 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 TSEN54Q7Z6J9 526 aaKnown RBP9.42□□□□□ -0.9
SRP54-208ENST00000555557 RBM45Q8IUH3 476 aaKnown RBP9.42□□□□□ -0.9
SRP54-208ENST00000555557 LACC1Q8IV20 430 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ZDHHC21Q8IVQ6 265 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 CLIP4Q8N3C7 705 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 OR4D11Q8NGI4 311 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 OR4C3Q8NH37 302 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ELP5Q8TE02 316 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 LZICQ8WZA0 190 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 NAF1Q96HR8 494 aaKnown RBP9.42□□□□□ -0.9
SRP54-208ENST00000555557 C7orf34Q96L11 122 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ADOQ96SZ5 270 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 EFHD1Q9BUP0 239 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 GPN2Q9H9Y4 310 aaPredicted RBP9.42□□□□□ -0.9
SRP54-208ENST00000555557 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 P4HTMQ9NXG6 502 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 RIMS3Q9UJD0 308 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 FBXL4Q9UKA2 621 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ANGPTL2Q9UKU9 493 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 ABCG2Q9UNQ0 655 aa9.42□□□□□ -0.9
SRP54-208ENST00000555557 MED19A0JLT2 244 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 ANKRD33BA6NCL7 494 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 AGAP5A6NIR3 686 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 M0R3H8 397 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 HNRNPRO43390 633 aaKnown RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 FRS3O43559 492 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 REM1O75628 298 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 SOX30O94993 753 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 LIFP15018 202 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 SDHBP21912 280 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ABCD3P28288 659 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 DCAF7P61962 342 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 FOXD4Q12950 439 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 PPP1R8Q12972 351 aaKnown RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 DECR1Q16698 335 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 IFI44LQ53G44 452 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 PDZK1Q5T2W1 519 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ATP1A1-AS1Q5TC04 95 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 LPCAT4Q643R3 524 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 PLAG1Q6DJT9 500 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 TCTN3Q6NUS6 607 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ERMP1Q7Z2K6 904 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 PEX5LQ8IYB4 626 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 TMEM102Q8N9M5 508 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 VANGL1Q8TAA9 524 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 ARSGQ96EG1 525 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 G6PC3Q9BUM1 346 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 SPATA5L1Q9BVQ7 753 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 SCNM1Q9BWG6 230 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 DEFB126Q9BYW3 111 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 MAGIXQ9H6Y5 334 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ZBTB20Q9HC78 741 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 IL1RAPQ9NPH3 570 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 J3KTA2 159 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 MAN1A2O60476 641 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 BCAS1O75363 584 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 ZFAND5O76080 213 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 CST1P01037 141 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 FABP3P05413 133 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 LIPCP11150 499 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 FASP25445 335 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 DCTP40126 519 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 PLCXD2Q0VAA5 305 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 Q0VFX4 171 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ATP1A4Q13733 1029 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 EXT1Q16394 746 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.41□□□□□ -0.9
SRP54-208ENST00000555557 IQCCQ4KMZ1 466 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 FCRLBQ6BAA4 426 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms