RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 G6PDP11413 515 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 CPN1P15169 458 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 TIMP3P35625 211 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 DSCR4P56555 118 aaPredicted RBP21.15■□□□□ 0.98
CHFR-222ENST00000544093 RCAN2Q14206 197 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 BHLHB9Q6PI77 547 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 ANKRD42Q8N9B4 389 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 OR56A1Q8NGH5 318 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 RAB3IL1Q8TBN0 382 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 ZPLD1Q8TCW7 415 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 SLC9A6Q92581 669 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 FAM120BQ96EK7 910 aaKnown RBP21.15■□□□□ 0.98
CHFR-222ENST00000544093 RMND5BQ96G75 393 aaPredicted RBP21.15■□□□□ 0.98
CHFR-222ENST00000544093 WDYHV1Q96HA8 205 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 TBL1XR1Q9BZK7 514 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 C20orf27Q9GZN8 174 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 PTGES2Q9H7Z7 377 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 AKTIPQ9H8T0 292 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 SLC24A3Q9HC58 644 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 NKIRAS1Q9NYS0 192 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 Q9UFV3 132 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 FBXL2Q9UKC9 423 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 HCFC1P51610 2035 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 APCP25054 2843 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 ABCA12Q86UK0 2595 aa21.15■□□□□ 0.98
CHFR-222ENST00000544093 FAM90A27PA6NNH2 459 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 SCO2O43819 266 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 TOXO94900 526 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 NGFRP08138 427 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 CHMP24386 653 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 DPP4P27487 766 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 KIR3DL1P43629 444 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 RFX3P48380 749 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 DIO3P55073 304 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 GFRA1P56159 465 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 BST1Q10588 318 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.14■□□□□ 0.97
CHFR-222ENST00000544093 NSUN5P2Q63ZY6 315 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 TRIM42Q8IWZ5 723 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 FADS6Q8N9I5 356 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 STACQ99469 402 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 G6PC3Q9BUM1 346 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 DUSP26Q9BV47 211 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 ZNF395Q9H8N7 513 aaPredicted RBP21.14■□□□□ 0.97
CHFR-222ENST00000544093 CALHM2Q9HA72 323 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 DUSP22Q9NRW4 184 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 SIRT3Q9NTG7 399 aaPredicted RBP21.14■□□□□ 0.97
CHFR-222ENST00000544093 SNX8Q9Y5X2 465 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 LRBAP50851 2863 aa21.14■□□□□ 0.97
CHFR-222ENST00000544093 CD8B2A6NJW9 211 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 UTS2O95399 124 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 IL2RAP01589 272 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 ADH7P40394 386 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 C17orf67Q0P5P2 114 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 ATG16L1Q676U5 607 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 OR5M10Q6IEU7 315 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 KRTCAP2Q8N6L1 136 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 COX18Q8N8Q8 333 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 SLC16A11Q8NCK7 471 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 SFXN5Q8TD22 340 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 PIK3R3Q92569 461 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 SFXN2Q96NB2 322 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 TREX2Q9BQ50 279 aaPredicted RBP21.13■□□□□ 0.97
CHFR-222ENST00000544093 THAP1Q9NVV9 213 aa21.13■□□□□ 0.97
CHFR-222ENST00000544093 INTS1Q8N201 2190 aaKnown RBP21.13■□□□□ 0.97
CHFR-222ENST00000544093 GXYLT2A0PJZ3 443 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 NKX2-6A6NCS4 301 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 LINC01387J3KSC0 135 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 DVL2O14641 736 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 HMGN2P05204 90 aaKnown RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 ACP2P11117 423 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 IGFBP2P18065 325 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 MSX1P28360 303 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 SSTR2P30874 369 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 CCT3P49368 545 aaKnown RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 MAGOHP61326 146 aaKnown RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 TFF3Q07654 80 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 SPDYE7PQ495Y7 208 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 EXOSC6Q5RKV6 272 aaKnown RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 MEX3BQ6ZN04 569 aaKnown RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 GOT1L1Q8NHS2 421 aaPredicted RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 FAM110BQ8TC76 370 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 JADE3Q92613 823 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 TLCD1Q96CP7 247 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 LRRC46Q96FV0 321 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 PPP1R36Q96LQ0 422 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 BTBD2Q9BX70 525 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 UCK2Q9BZX2 261 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 MEAF6Q9HAF1 191 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 TMBIM4Q9HC24 238 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 ZNF629Q9UEG4 869 aaPredicted RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 FAF1Q9UNN5 650 aaPredicted RBP21.12■□□□□ 0.97
CHFR-222ENST00000544093 DCHS2Q6V1P9 2916 aa21.12■□□□□ 0.97
CHFR-222ENST00000544093 NUP214P35658 2090 aaPredicted RBP21.11■□□□□ 0.97
CHFR-222ENST00000544093 IGLV3-32A0A0A0MS00 114 aa21.11■□□□□ 0.97
CHFR-222ENST00000544093 KCNK2O95069 426 aa21.11■□□□□ 0.97
CHFR-222ENST00000544093 SNRPB2P08579 225 aaKnown RBP21.11■□□□□ 0.97
CHFR-222ENST00000544093 LBPP18428 481 aa21.11■□□□□ 0.97
CHFR-222ENST00000544093 EFNA1P20827 205 aaPredicted RBP21.11■□□□□ 0.97
CHFR-222ENST00000544093 CEACAM8P31997 349 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms