RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LIPT1Q9Y234 373 aa8.19□□□□□ -1.1
DDB1-217ENST00000540166 TUBAL3A6NHL2 446 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 WASH4PA8MWX3 477 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ARPC5O15511 151 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 AKAP8O43823 692 aaKnown RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 KHDRBS3O75525 346 aaKnown RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 LATS1O95835 1130 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 GLAP06280 429 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ACADLP28330 430 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 HOXA1P49639 335 aaPredicted RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 ARHGDIBP52566 201 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 IRF8Q02556 426 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 PTPRRQ15256 657 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ATP13A5Q4VNC0 1218 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TCTE1Q5JU00 501 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ANXA8L1Q5VT79 327 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 MLIPQ5VWP3 458 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 LRFN4Q6PJG9 635 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CXXC5Q7LFL8 322 aaKnown RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 NLRC3Q7RTR2 1065 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 BHLHA9Q7RTU4 235 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TSPAN33Q86UF1 283 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TMEM163Q8TC26 289 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SECISBP2Q96T21 854 aaKnown RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 DUSP26Q9BV47 211 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SGK2Q9HBY8 427 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NDUFAF4Q9P032 175 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ANK1P16157 1881 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 DOCK6Q96HP0 2047 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CPED1A4D0V7 1026 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 FAM25EA8MYX2 175 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 UPK3BL1B0FP48 263 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 UPK3BL2E5RIL1 263 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 PRKYO43930 277 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ADRB1P08588 477 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ALPIP09923 528 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 HOXC13P31276 330 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CDKN2CP42773 168 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 MRPL19P49406 292 aaKnown RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 DUSP3P51452 185 aaPredicted RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 WNT4P56705 351 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 POLR2GP62487 172 aaKnown RBP eCLIP8.18□□□□□ -1.1
DDB1-217ENST00000540166 PITPNAQ00169 270 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SEMG2Q02383 582 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ZNF91Q05481 1191 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 PRAMEF14Q5SWL7 426 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 MANEALQ5VSG8 457 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TMIGD1Q6UXZ0 262 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CFAP206Q8IYR0 622 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SYT14Q8NB59 555 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NANPQ8TBE9 248 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TM9SF4Q92544 642 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SORCS2Q96PQ0 1159 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ACTL8Q9H568 366 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NANSQ9NR45 359 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 RLIMQ9NVW2 624 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ZNF225Q9UK10 706 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ACACBO00763 2458 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 A0A1B0GVT2 93 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SLC28A2O43868 658 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SDC3O75056 442 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 PTP4A3O75365 173 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NCR1O76036 304 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TCRBP04435 133 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NDUFV2P19404 249 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 MEOX2P50222 304 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SMIM11AP58511 58 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SCARB2Q14108 478 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 VEZF1Q14119 521 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CST6Q15828 149 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 CERS6Q6ZMG9 384 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 IZUMO1Q8IYV9 350 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 SAMD14Q8IZD0 417 aaPredicted RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 OR4D10Q8NGI6 311 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ACOT12Q8WYK0 555 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 FCRL1Q96LA6 429 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 DDOQ99489 341 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 PIP5K1AQ99755 562 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 TREX2Q9BQ50 279 aaPredicted RBP8.18□□□□□ -1.1
DDB1-217ENST00000540166 KATNB1Q9BVA0 655 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 ATG10Q9H0Y0 220 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 DNTTIP1Q9H147 329 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 MAP4K5Q9Y4K4 846 aa8.18□□□□□ -1.1
DDB1-217ENST00000540166 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 TRBC2A0A5B9 178 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CD8B2A6NJW9 211 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 PROB1E7EW31 1015 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 NME6O75414 186 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 VNN2O95498 520 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CD8BP10966 210 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 PITPNBP48739 271 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 STK19P49842 368 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 PGDP52209 483 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CDH4P55283 916 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 RING1Q06587 406 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 TCEA2Q15560 299 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ATXN7L2Q5T6C5 722 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms