RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZC4H2Q9NQZ6 224 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 ACSS1Q9NUB1 689 aaPredicted RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 CD207Q9UJ71 328 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 SLC6A14Q9UN76 642 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 POFUT2Q9Y2G5 429 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 CMAHPQ9Y471 501 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 PRUNE2Q8WUY3 3088 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 TRBV4-1A0A0J9YWV2 114 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 FFAR1O14842 300 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 TPST2O60704 377 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 RHCEP18577 417 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 AZGP1P25311 298 aaKnown RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 FRKP42685 505 aaPredicted RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 RIN1Q13671 783 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 ELOAQ14241 798 aaKnown RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 LEXMQ3ZCV2 418 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 WDR53Q7Z5U6 358 aaPredicted RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 SFTPA2Q8IWL1 248 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 C9orf62Q8N4C0 152 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 DTX3Q8N9I9 347 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 OR4D11Q8NGI4 311 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 FAM131CQ96AQ9 280 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 CNRIP1Q96F85 164 aaPredicted RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 C16orf58Q96GQ5 468 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 GPR137Q96N19 417 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 MAPKAP1Q9BPZ7 522 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 TREX2Q9BQ50 279 aaPredicted RBP10.84□□□□□ -0.67
USP35-207ENST00000530546 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 ENTPD4Q9Y227 616 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 HEBP2Q9Y5Z4 205 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 M0R3H8 397 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 RFPL3O75679 317 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 GASTP01350 101 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 CSF3P09919 207 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 HNRNPA2B1P22626 353 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 GGT2P36268 569 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 MRPL28Q13084 256 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 PDZK1Q5T2W1 519 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 GARNL3Q5VVW2 1013 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 TEX261Q6UWH6 196 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 PAMR1Q6UXH9 720 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 PRSS42Q7Z5A4 293 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SLC30A8Q8IWU4 369 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 LAX1Q8IWV1 398 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 MFSD9Q8NBP5 474 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 DOK4Q8TEW6 326 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 NMNAT1Q9HAN9 279 aaPredicted RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 IMPAD1Q9NX62 359 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 P2RX2Q9UBL9 471 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 DUSP12Q9UNI6 340 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 U3KQ87 197 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SCN3AQ9NY46 2000 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 LINC00854A0A1B0GVQ3 168 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 TOR1AO14656 332 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 HSMCR30P0CW71 290 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 AHRP35869 848 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 KIAA1024LP59773 190 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 TRA2BP62995 288 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 ARSKQ6UWY0 536 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 FAM131AQ6UXB0 335 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 KAT2AQ92830 837 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 COL26A1Q96A83 441 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SCARF2Q96GP6 870 aaPredicted RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 MSANTD3Q96H12 275 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ZNF607Q96SK3 696 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ASPNQ9BXN1 380 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 QRSL1Q9H0R6 528 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 TRIM45Q9H8W5 580 aaPredicted RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 ERVMER34-1Q9H9K5 563 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 FBRSQ9HAH7 460 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SEMA3GQ9NS98 782 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 NDRG2Q9UN36 371 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 MYL12BO14950 172 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SOX14O95416 240 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 HMGN2P05204 90 aaKnown RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 STSP08842 583 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ZNF888P0CJ79 500 aaPredicted RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 MYL12AP19105 171 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 DRD1P21728 446 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
USP35-207ENST00000530546 LTB4RQ15722 352 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ALG11Q2TAA5 492 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 ZNF425Q6IV72 752 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 Q6ZSR6 202 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 COMTD1Q86VU5 262 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 KLHL6Q8WZ60 621 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 MGLLQ99685 303 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 CDCA4Q9BXL8 241 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 OR6C2Q9NZP2 312 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 TMCC3Q9ULS5 477 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 SCML1Q9UN30 329 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 KCNE3Q9Y6H6 103 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 CSNK1G3Q9Y6M4 447 aa10.83□□□□□ -0.68
USP35-207ENST00000530546 OR6C74A6NCV1 312 aa10.82□□□□□ -0.68
USP35-207ENST00000530546 TSPAN4O14817 238 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms