RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RAB2AP61019 212 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 INSM1Q01101 510 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ECH1Q13011 328 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 FZD5Q13467 585 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DNASE1L3Q13609 305 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ARL6IP1Q15041 203 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CEBPEQ15744 281 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF239Q16600 458 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF630Q2M218 657 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM196Q5HYL7 178 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 PHYHD1Q5SRE7 291 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ANKRD22Q5VYY1 191 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TRIM46Q7Z4K8 759 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM150AQ86TG1 271 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CATSPERDQ86XM0 798 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RBM45Q8IUH3 476 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 C10orf107Q8IVU9 208 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 HSD17B11Q8NBQ5 300 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 KIAA0895Q8NCT3 520 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 GLIS3Q8NEA6 775 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 OR13C9Q8NGT0 318 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 OR13D1Q8NGV5 346 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 BAHD1Q8TBE0 780 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DNAJB14Q8TBM8 379 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CXorf40AQ8TE69 158 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 WFIKKN2Q8TEU8 576 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 FAM222BQ8WU58 562 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 C1orf54Q8WWF1 131 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ACOT11Q8WXI4 607 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CACNG8Q8WXS5 425 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RPL3LQ92901 407 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 MAGOHBQ96A72 148 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 FBXL8Q96CD0 374 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RSPRY1Q96DX4 576 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RAB3CQ96E17 227 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 MRGPRX1Q96LB2 322 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 NOL4LQ96MY1 436 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SFXN2Q96NB2 322 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RNF2Q99496 336 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CITED1Q99966 193 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SLC30A2Q9BRI3 323 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 PRRG3Q9BZD7 231 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TRIM31Q9BZY9 425 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 IL22Q9GZX6 179 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ING2Q9H160 280 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 XYLT2Q9H1B5 865 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 NANOGQ9H9S0 305 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SPAG4Q9NPE6 437 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 OBP2BQ9NPH6 170 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 LATS2Q9NRM7 1088 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DMAC2Q9NW81 257 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DUS2Q9NX74 493 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 MED11Q9P086 117 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TMEM216Q9P0N5 145 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 GCNT4Q9P109 453 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SERTAD1Q9UHV2 236 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF225Q9UK10 706 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CORO2BQ9UQ03 480 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 POFUT2Q9Y2G5 429 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 PADI2Q9Y2J8 665 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 STRAPQ9Y3F4 350 aaKnown RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF337Q9Y3M9 751 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 PLEKHM1Q9Y4G2 1056 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ASB1Q9Y576 335 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 SLCO1B1Q9Y6L6 691 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ATG2BQ96BY7 2078 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CEP250Q9BV73 2442 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 COL4A3Q01955 1670 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 POM121BA6NF01 834 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 URADA6NGE7 173 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CD8B2A6NJW9 211 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SHISA7A6NL88 538 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 LGALS16A8MUM7 142 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 H3BNH8 94 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 KLRC4-KLRK1H3BQV0 150 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PPP6CO00743 305 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 NRG2O14511 850 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 KLRC4O43908 158 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 SCGB2A1O75556 95 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 C1QBP02746 253 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 GYPCP04921 128 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 ATXN1LP0C7T5 689 aaKnown RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TDGF1P13385 188 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 MATN1P21941 496 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CBLP22681 906 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CPT2P23786 658 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 CXCR3P49682 368 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 DNA2P51530 1060 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 VAMP7P51809 220 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
HDAC3-216ENST00000523088 TLE4Q04727 773 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 POU4F2Q12837 409 aa7.07□□□□□ -1.28
HDAC3-216ENST00000523088 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms