RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZIC2O95409 532 aaPredicted RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 ICAM2P13598 275 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 LIFP15018 202 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 ATP6V1C1P21283 382 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 RPS4Y1P22090 263 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 SLC7A1P30825 629 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 MMP16P51512 607 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 PSMD4P55036 377 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 DECR1Q16698 335 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 CYBRD1Q53TN4 286 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 SLC34A3Q8N130 599 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 PAPD5Q8NDF8 572 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 LZICQ8WZA0 190 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 COL21A1Q96P44 957 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 UGT2B28Q9BY64 529 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 TRIM45Q9H8W5 580 aaPredicted RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 CACYBPQ9HB71 228 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 P4HTMQ9NXG6 502 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 FBXL4Q9UKA2 621 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 MSRB2Q9Y3D2 182 aa12.07□□□□□ -0.48
CPNE3-205ENST00000522240 MRPS18BQ9Y676 258 aaKnown RBP12.07□□□□□ -0.48
CPNE3-205ENST00000522240 M0QX08 132 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 PEX12O00623 359 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 SUV39H1O43463 412 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 PRKNO60260 465 aaPredicted RBP12.06□□□□□ -0.48
CPNE3-205ENST00000522240 KRT36O76013 467 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 MFN2O95140 757 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 IL33O95760 270 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 OPN1SWP03999 348 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ALPPP05187 535 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 THBS1P07996 1170 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CD247P20963 164 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CHRNEQ04844 493 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 NNATQ16517 81 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CRTC2Q53ET0 693 aaPredicted RBP12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CCNJQ5T5M9 372 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 FIGNL1Q6PIW4 674 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 DHRS4L2Q6PKH6 230 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 GALNT10Q86SR1 603 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ARMC8Q8IUR7 673 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 TAGAPQ8N103 731 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ARMC10Q8N2F6 343 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 BCORP1Q8N888 145 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CANT1Q8WVQ1 401 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 SLC47A1Q96FL8 570 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 PYURFQ96I23 114 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 DEFB126Q9BYW3 111 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 DCLRE1BQ9H816 532 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 S100A14Q9HCY8 104 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 CCM2LQ9NUG4 571 aaPredicted RBP12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ARMC1Q9NVT9 282 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 SEC14L3Q9UDX4 400 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 IL17BQ9UHF5 180 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 BAG5Q9UL15 447 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 IFT52Q9Y366 437 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 ACACAQ13085 2346 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 PCSK5Q92824 1860 aa12.06□□□□□ -0.48
CPNE3-205ENST00000522240 AGAP5A6NIR3 686 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 TMEM200CA6NKL6 621 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 TMEM229AB2RXF0 380 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 H3BNX3 289 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SYT5O00445 386 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PRKD3O94806 890 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF682O95780 498 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 IGKV1D-16P01601 117 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SEMG1P04279 462 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SERPINA7P05543 415 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 DBIP07108 87 aaKnown RBP12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PABPC4LP0CB38 370 aaKnown RBP12.05□□□□□ -0.48
CPNE3-205ENST00000522240 RAP2AP10114 183 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PRKAR1BP31321 381 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 KRT20P35900 424 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 MAGEA2P43356 314 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 KCNJ5P48544 419 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 ERFP50548 548 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 NR0B1P51843 470 aaKnown RBP12.05□□□□□ -0.48
CPNE3-205ENST00000522240 NRG3P56975 720 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SELENOWP63302 87 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 CHRNB3Q05901 458 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PLCXD2Q0VAA5 305 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 CLN3Q13286 438 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 ATP1A4Q13733 1029 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 TGIF1Q15583 401 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 FLYWCH1Q4VC44 716 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 EIPR1Q53HC9 387 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 ENPP6Q6UWR7 440 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 KBTBD2Q8IY47 623 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SLC15A4Q8N697 577 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 OR4N2Q8NGD1 307 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms