RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 LILRB5O75023 590 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CPNE3O75131 537 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PPM1BO75688 479 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TGM6O95932 706 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 B3GALT4O96024 378 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 IGF2P01344 180 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GBAP04062 536 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HMGN2P05204 90 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TPOP07202 933 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TACSTD2P09758 323 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RAB40ALP0C0E4 278 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR2T7P0C7T2 308 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LIMS3P0CW19 117 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LIMS4P0CW20 117 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR12D1P0DN82 309 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LAMP2P13473 410 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRG2P13727 222 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CPN1P15169 458 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SPNP16150 400 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRKCAP17252 672 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RAB3BP20337 219 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NOS3P29474 1203 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LCN1P31025 176 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC6A6P31641 620 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FEN1P39748 380 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OPRD1P41143 372 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CTSOP43234 321 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KIR2DL3P43628 341 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OMPP47874 163 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OR3A3P47888 321 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CENPAP49450 140 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NKX2-5P52952 324 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 P2RX3P56373 397 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NRG3P56975 720 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 GMFBP60983 142 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SRP54P61011 504 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RPS25P62851 125 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 EFNB1P98172 346 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FOXK2Q01167 660 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FABP5Q01469 135 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MC1RQ01726 317 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TAGLNQ01995 201 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SSBP1Q04837 148 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MXD1Q05195 221 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRDX1Q06830 199 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 DUSP8Q13202 625 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SNTA1Q13424 505 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PIN1Q13526 163 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CAMK2BQ13554 666 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CAMK1Q14012 370 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LASP1Q14847 261 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PDGFRLQ15198 375 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PTPRRQ15256 657 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNHIT3Q15649 155 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CARTPTQ16568 116 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NTRK2Q16620 822 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MPEG1Q2M385 716 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 BTBD16Q32M84 506 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 HNRNPA1L2Q32P51 320 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ARHGAP11BQ3KRB8 267 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LEXMQ3ZCV2 418 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 RPS26P11Q5JNZ5 115 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 UBE2NLQ5JXB2 153 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC35D3Q5M8T2 416 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ELFN2Q5R3F8 820 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MANEAQ5SRI9 462 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LY6G5CQ5SRR4 150 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 C9orf64Q5T6V5 341 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PRPF38BQ5VTL8 546 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 AADACL4Q5VUY2 407 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PLPP4Q5VZY2 271 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM219BQ5XKK7 198 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 METRNLQ641Q3 311 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KIAA1161Q6NSJ0 714 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ANKRD54Q6NXT1 300 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NIPAL3Q6P499 406 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SFXN4Q6P4A7 337 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF613Q6PF04 617 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SMARCD3Q6STE5 483 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM107Q6UX40 140 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KIAA1324Q6UXG2 1013 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 LRRN1Q6UXK5 716 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF852Q6ZMS4 543 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 WDR88Q6ZMY6 472 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 Q6ZPB1 254 aaPredicted RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MTSS1LQ765P7 747 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ABHD13Q7L211 337 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 MEPCEQ7L2J0 689 aaKnown RBP3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 OVCH1Q7RTY7 1134 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 FAM220AQ7Z4H9 259 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 KCTD20Q7Z5Y7 419 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZER1Q7Z7L7 766 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 TMEM25Q86YD3 366 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 CMIPQ8IY22 773 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ZNF440Q8IYI8 595 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 PM20D2Q8IYS1 436 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 ELMOD2Q8IZ81 293 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SLC7A5P1Q8MH63 180 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 NLGN4XQ8N0W4 816 aa3.16□□□□□ -1.9
RNU4ATAC3P-201ENST00000516699 SYS1Q8N2H4 156 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms