RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 UTP6Q9NYH9 597 aaKnown RBP3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 ATP6V1HQ9UI12 483 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 VSIG4Q9Y279 399 aa3.79□□□□□ -1.8
HMGCS1-207ENST00000514610 BICDL2A1A5D9 508 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 SDHDO14521 159 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 CDX4O14627 284 aaPredicted RBP3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 SCGB2A1O75556 95 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 B3GALNT1O75752 331 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 IGHV1-2P23083 117 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 MEOX2P50222 304 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 PDZK1IP1Q13113 114 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 CAMK4Q16566 473 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 GSG1Q2KHT4 349 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 QRICH1Q2TAL8 776 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 RNF212Q495C1 297 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 CYS1Q717R9 158 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 CATSPER4Q7RTX7 472 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 GIPC3Q8TF64 312 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 TFB1MQ8WVM0 346 aaKnown RBP3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 DHTKD1Q96HY7 919 aaPredicted RBP3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 SLC25A51Q9H1U9 297 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 LPAR2Q9HBW0 351 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 AGPAT5Q9NUQ2 364 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 ANKMY1Q9P2S6 941 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
HMGCS1-207ENST00000514610 CCDC7Q96M83 1385 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 NOL4O94818 638 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 IGKV3-15P01624 115 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 CYP2F1P24903 491 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 DPP4P27487 766 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 XCR1P46094 333 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 ASAH1Q13510 395 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 DPYSL3Q14195 570 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 TRIP10Q15642 601 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 FAM120AOSQ5T036 256 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 MEDAGQ5VYS4 303 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 UFSP1Q6NVU6 142 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 ARSKQ6UWY0 536 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 CBWD2Q8IUF1 395 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 C9orf40Q8IXQ3 194 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 GCNT2Q8N0V5 402 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 GPR137CQ8N3F9 429 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 CCDC26Q8TAB7 109 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 ELMO2Q96JJ3 720 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 CASD1Q96PB1 797 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 OR5M11Q96RB7 305 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 TBCDQ9BTW9 1192 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 COMMD4Q9H0A8 199 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 SLITRK2Q9H156 845 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 B9D1Q9UPM9 204 aa3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 CFAP65Q6ZU64 1925 aaKnown RBP3.77□□□□□ -1.81
HMGCS1-207ENST00000514610 A0A1B0GUL7 405 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 NUDT21O43809 227 aaKnown RBP3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 EFNA2O43921 213 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 OR4F21O95013 312 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 DIRAS3O95661 229 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ANXA3P12429 323 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 LIM2P55344 173 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 SERTAD2Q14140 314 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 CYP51A1Q16850 503 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 GLYR1Q49A26 553 aaPredicted RBP3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 LINC01620Q4KN68 170 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 SLC22A10Q63ZE4 541 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 NIPAL3Q6P499 406 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 HSD11B1LQ7Z5J1 315 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF584Q8IVC4 421 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 MCOLN2Q8IZK6 566 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 BPIFB2Q8N4F0 458 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 C11orf42Q8N5U0 333 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF525Q8N782 197 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 STKLD1Q8NE28 680 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 UBE2Q2Q8WVN8 375 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ARNTL2Q8WYA1 636 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 PINX1Q96BK5 328 aaKnown RBP3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 FICDQ9BVA6 458 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 MRPL13Q9BYD1 178 aaKnown RBP3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ELOVL4Q9GZR5 314 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 CALHM2Q9HA72 323 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF275Q9NSD4 429 aaPredicted RBP3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 GALPQ9UBC7 116 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 AP4B1Q9Y6B7 739 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 USP6P35125 1406 aa3.76□□□□□ -1.81
HMGCS1-207ENST00000514610 A0A087WZY1 265 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 KLF18A0A0U1RQI7 1052 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 ESYT2A0FGR8 921 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 AK1P00568 194 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 THRBP10828 461 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 NCF1P14598 390 aaPredicted RBP3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 UQCRBP14927 111 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 KLK2P20151 261 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 AXLP30530 894 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 CDH5P33151 784 aaPredicted RBP3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 TRPC1P48995 793 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 EMDP50402 254 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 SCGB2A2Q13296 93 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 CHI3L2Q15782 390 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 ZBED8Q8IZ13 594 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 SPEM1Q8N4L4 309 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms