RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FLYWCH1Q4VC44 716 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 SAMD4BQ5PRF9 694 aaKnown RBP20■□□□□ 0.79
C9orf3-222ENST00000496567 PRAMEF8Q5VWM4 474 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 PRAMEF7Q5VXH5 474 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 AP1ARQ63HQ0 302 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 BNC2Q6ZN30 1099 aaPredicted RBP20■□□□□ 0.79
C9orf3-222ENST00000496567 IFNEQ86WN2 208 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 PTOV1Q86YD1 416 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 ARHGAP24Q8N264 748 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 OR2T12Q8NG77 320 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 PMM1Q92871 262 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 HGDQ93099 445 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 SLC7A6OSQ96CW6 309 aaPredicted RBP20■□□□□ 0.79
C9orf3-222ENST00000496567 TMEM19Q96HH6 336 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 BTBD10Q9BSF8 475 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 HOXD1Q9GZZ0 328 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20■□□□□ 0.79
C9orf3-222ENST00000496567 ALG2Q9H553 416 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 FBXO34Q9NWN3 711 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 DSPP15924 2871 aaKnown RBP20■□□□□ 0.79
C9orf3-222ENST00000496567 CYP4B1P13584 511 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 SCARB2Q14108 478 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 VMACQ2NL98 169 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 SPATS1Q496A3 300 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 SLC22A10Q63ZE4 541 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 REEP3Q6NUK4 255 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 ZZZ3Q8IYH5 903 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 OR10G3Q8NGC4 313 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 NFKBIDQ8NI38 313 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 C9orf43Q8TAL5 461 aaPredicted RBP20■□□□□ 0.79
C9orf3-222ENST00000496567 SAP130Q9H0E3 1048 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 TIMMDC1Q9NPL8 285 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 ANGPT4Q9Y264 503 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 PCDHGA10Q9Y5H3 936 aa20■□□□□ 0.79
C9orf3-222ENST00000496567 A0A0G2JPF8 293 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 HNRNPCL2B2RXH8 293 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 HNRNPCL3B7ZW38 293 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 FCMRO60667 390 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 NEURL1O76050 574 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 UTS2O95399 124 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 CHRM4P08173 479 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 HNRNPCL4P0DMR1 293 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 MAPK11Q15759 364 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 SPINK14Q6IE38 97 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 TYW3Q6IPR3 259 aaKnown RBP19.99■□□□□ 0.79
C9orf3-222ENST00000496567 FRRS1Q6ZNA5 592 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 YTHDF3Q7Z739 585 aaKnown RBP19.99■□□□□ 0.79
C9orf3-222ENST00000496567 HIPK4Q8NE63 616 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 TNIP2Q8NFZ5 429 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 SPPL2AQ8TCT8 520 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 PAQR8Q8TEZ7 354 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 SIGLEC12Q96PQ1 595 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 SLC38A1Q9H2H9 487 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 MTHFD2LQ9H903 347 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-222ENST00000496567 BCL2L10Q9HD36 194 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 UBQLN4Q9NRR5 601 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 CNIH4Q9P003 139 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 MKLN1Q9UL63 735 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 PRPF19Q9UMS4 504 aaKnown RBP19.99■□□□□ 0.79
C9orf3-222ENST00000496567 TP53TG5Q9Y2B4 290 aa19.99■□□□□ 0.79
C9orf3-222ENST00000496567 CHCHD2Q9Y6H1 151 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-222ENST00000496567 EXPH5Q8NEV8 1989 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 PKD1L2Q7Z442 2459 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ELOVL7A1L3X0 281 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ERVH48-1M5A8F1 160 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 DPM1O60762 260 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ICOSLGO75144 302 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 SLC25A12O75746 678 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 SFTPCP11686 197 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 HPGDP15428 266 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 PCGF2P35227 344 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 GSK3BP49841 420 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 TNFSF10P50591 281 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 CHRNEQ04844 493 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 GPR68Q15743 365 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 TMEM81Q6P7N7 255 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ASB18Q6ZVZ8 466 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ZAR1Q86SH2 424 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ZNF619Q8N2I2 560 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 ZNF527Q8NB42 609 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 MDS2Q8NDY4 140 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 BBS10Q8TAM1 723 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 OIT3Q8WWZ8 545 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 KCTD14Q9BQ13 255 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-222ENST00000496567 TREX2Q9BQ50 279 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-222ENST00000496567 RUBCNLQ9H714 662 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 SH2D2AQ9NP31 389 aa19.98■□□□□ 0.79
C9orf3-222ENST00000496567 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.98■□□□□ 0.79
C9orf3-222ENST00000496567 KIAA0513O60268 411 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 PGM3O95394 542 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 PDGFAP04085 211 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 P04436 131 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 NGFRP08138 427 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 CD46P15529 392 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 TBXA2RP21731 343 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 CLK3P49761 638 aaKnown RBP19.97■□□□□ 0.79
C9orf3-222ENST00000496567 ATP12AP54707 1039 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 VEZF1Q14119 521 aa19.97■□□□□ 0.79
C9orf3-222ENST00000496567 LACTB2Q53H82 288 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-222ENST00000496567 INTS11Q5TA45 600 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms