RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MST1LQ2TV78 715 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 Q6ZPA2 131 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 NUFIP2Q7Z417 695 aaKnown RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 GALNT10Q86SR1 603 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 TBC1D1Q86TI0 1168 aaPredicted RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF540Q8NDQ6 660 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 ATG4AQ8WYN0 398 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 MTBPQ96DY7 904 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC35A4Q96G79 324 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 BPIFA3Q9BQP9 254 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SORBS1Q9BX66 1292 aaKnown RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SLITRK2Q9H156 845 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 ZBTB26Q9HCK0 441 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 GLRX2Q9NS18 164 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 LOC100653049A0A140TA62 436 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ZCWPW2A0A1B0GU75 182 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 GLOD5A6NK44 160 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF814B7Z6K7 855 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ACOX3O15254 700 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 H2AFYO75367 372 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 KRT34O76011 436 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ADAP00813 363 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ENO2P09104 434 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 DHRS4L1P0CG22 281 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 HK1P19367 917 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 CD40P25942 277 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 STIP1P31948 543 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 GDF5P43026 501 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SSR2P43308 183 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 PGGT1BP53609 377 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 CDKN2DP55273 166 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 RWDD2BP57060 319 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SLAMF1Q13291 335 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 MORF4L2Q15014 288 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 CARTPTQ16568 116 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SGCBQ16585 318 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 TMEM44Q2T9K0 475 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 C18orf21Q32NC0 220 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 COX20Q5RI15 118 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 RBM20Q5T481 1227 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 PPP4R4Q6NUP7 873 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC22A25Q6T423 547 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SASS6Q6UVJ0 657 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 BHLHA15Q7RTS1 189 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 GPR180Q86V85 440 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 KRT78Q8N1N4 520 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ANKS4BQ8N8V4 417 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SRFBP1Q8NEF9 429 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 OR2M3Q8NG83 312 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 OR4K17Q8NGC6 315 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 OR10D3Q8NH80 312 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF473Q8WTR7 871 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 DTNBP1Q96EV8 351 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 WDR34Q96EX3 536 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SNX18Q96RF0 628 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC6A7Q99884 636 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 INPP5KQ9BT40 448 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 SUCNR1Q9BXA5 334 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF717Q9BY31 904 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 PRRG4Q9BZD6 226 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 DDX47Q9H0S4 455 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 MMP27Q9H306 513 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 CDC42EP4Q9H3Q1 356 aaKnown RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 DSN1Q9H410 356 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 NHEJ1Q9H9Q4 299 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 MYOZ1Q9NP98 299 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 ACSS1Q9NUB1 689 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 MS4A12Q9NXJ0 267 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 CORO1CQ9ULV4 474 aaPredicted RBP6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 TFR2Q9UP52 801 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 AP4B1Q9Y6B7 739 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 PMF1-BGLAPU3KQ54 211 aa6.23□□□□□ -1.41
PDLIM1-203ENST00000490391 NPIPA5A0A0B4J1W7 369 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 A0A1W2PR48 441 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 NPIPA7E9PJI5 369 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 EIF1AYO14602 144 aaKnown RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TO15178 435 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 LIASO43766 372 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TSPAN2O60636 221 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 SHOX2O60902 331 aaPredicted RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 SH3BGRLO75368 114 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 LYZL6O75951 148 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 PGM3O95394 542 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 STAMBPO95630 424 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 ZSCAN5DPP0CG00 497 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 NPIPA8P0DM63 369 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 PTAFRP25105 342 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 GABRB3P28472 473 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 GCH1P30793 250 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 CHRNB3Q05901 458 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 MGAT2Q10469 447 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 GANABQ14697 944 aaKnown RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TRIP10Q15642 601 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 STK11Q15831 433 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 KCNMB1Q16558 191 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 AP5B1Q2VPB7 878 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TMEM35AQ53FP2 167 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TIMM23BQ5SRD1 257 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms