RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 WNK2Q9Y3S1 2297 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 CIB4A0PJX0 185 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 TNFSF11O14788 317 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 OPN1LWP04000 364 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PGCP20142 388 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 ME2P23368 584 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PRTN3P24158 256 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PPICP45877 212 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 CARD18P57730 90 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 SARNPP82979 210 aaKnown RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 TRIP10Q15642 601 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 SWI5Q1ZZU3 235 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 KHDRBS2Q5VWX1 349 aaKnown RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 OR52E8Q6IFG1 317 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 Q6ZPA2 131 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 LARP4Q71RC2 724 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 FADS6Q8N9I5 356 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 OR4K14Q8NGD5 310 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 WDR60Q8WVS4 1066 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 C22orf15Q8WYQ4 148 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 C1GALT1C1Q96EU7 318 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 SERPINB12Q96P63 405 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 DUX5Q96PT3 197 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 NAP1L3Q99457 506 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 ZMAT3Q9HA38 289 aaKnown RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 TIGARQ9NQ88 270 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 LYARQ9NX58 379 aaKnown RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PDP1Q9P0J1 537 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-233ENST00000489352 KLHL13Q9P2N7 655 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 PRODH2Q9UF12 536 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
HDAC6-233ENST00000489352 TRAV20A0A0B4J274 112 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 MAGEB16A2A368 324 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 GMFGO60234 142 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 PRKD3O94806 890 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 KNG1P01042 644 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 YES1P07947 543 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 MAGEA1P43355 309 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 CLK3P49761 638 aaKnown RBP10.1□□□□□ -0.79
HDAC6-233ENST00000489352 XKP51811 444 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 TPM4P67936 248 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 DUSP2Q05923 314 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 EXOSC7Q15024 291 aaKnown RBP10.1□□□□□ -0.79
HDAC6-233ENST00000489352 MST1LQ2TV78 715 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 RBM43Q6ZSC3 357 aaKnown RBP10.1□□□□□ -0.79
HDAC6-233ENST00000489352 ESPNLQ6ZVH7 1005 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 ZCCHC7Q8N3Z6 543 aaKnown RBP10.1□□□□□ -0.79
HDAC6-233ENST00000489352 OR2V1Q8NHB1 315 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 ABHD3Q8WU67 409 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 OSTF1Q92882 214 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 UBE2E3Q969T4 207 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 SLC25A28Q96A46 364 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 SLC35A4Q96G79 324 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 CHP1Q99653 195 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 C1QTNF6Q9BXI9 259 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 OR51B5Q9H339 312 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 SLC52A3Q9NQ40 469 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 MCM8Q9UJA3 840 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 MOKQ9UQ07 419 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 CORINQ9Y5Q5 1042 aa10.1□□□□□ -0.79
HDAC6-233ENST00000489352 A0A1W2PR48 441 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 C17orf51A8MQB3 221 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 ZNF814B7Z6K7 855 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 SHISA8B8ZZ34 492 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 AKR1B15C9JRZ8 316 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 TO15178 435 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 SLU7O95391 586 aaKnown RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 FAM58BPP0C7Q3 252 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 PORP16435 677 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 EVI2BP34910 448 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 SERPINF1P36955 418 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 PNLIPRP2P54317 469 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 GAS1P54826 345 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 CDKN2DP55273 166 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 TIAL1Q01085 375 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 MORF4L2Q15014 288 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 ARL13AQ5H913 290 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 ARMC3Q5W041 872 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 SPATA19Q7Z5L4 167 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 LUZP1Q86V48 1076 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 SYT14Q8NB59 555 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 UHMK1Q8TAS1 419 aaKnown RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 MRAPQ8TCY5 172 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 DUSP19Q8WTR2 217 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 ZNF473Q8WTR7 871 aaKnown RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 NEU4Q8WWR8 484 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 ALG3Q92685 438 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 FAM167BQ9BTA0 163 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 LRRC1Q9BTT6 524 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 NARFLQ9H6Q4 476 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 CNOT10Q9H9A5 744 aaKnown RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 FBXO9Q9UK97 447 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-233ENST00000489352 VDAC3Q9Y277 283 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms