RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
TRAIP-209ENST00000488860 MKLN1Q9UL63 735 aa11.34□□□□□ -0.59
TRAIP-209ENST00000488860 LAMA5O15230 3695 aa11.33□□□□□ -0.59
TRAIP-209ENST00000488860 NINQ8N4C6 2090 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 OR6C70A6NIJ9 312 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 KIAA0513O60268 411 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 FCMRO60667 390 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 ICOSLGO75144 302 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 CEACAM4O75871 244 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 ZIC2O95409 532 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 HPGDP15428 266 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 NCK1P16333 377 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 MSX2P35548 267 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 DCTP40126 519 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 CYB561P49447 251 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 HLCSP50747 726 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 CHRNEQ04844 493 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 TUBA3CQ13748 450 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 EFR3AQ14156 821 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 MAPK11Q15759 364 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 NTRK2Q16620 822 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 ST3GAL2Q16842 350 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 GRAMD1BQ3KR37 738 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 LRRC23Q53EV4 343 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 TYW3Q6IPR3 259 aaKnown RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 HPS6Q86YV9 775 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 SLC30A8Q8IWU4 369 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 ARHGAP24Q8N264 748 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 TNIP2Q8NFZ5 429 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 FAM110BQ8TC76 370 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 FIG4Q92562 907 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 CADM1Q9BY67 442 aaKnown RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
TRAIP-209ENST00000488860 SLC38A1Q9H2H9 487 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 LRFN1Q9P244 771 aa11.33□□□□□ -0.6
TRAIP-209ENST00000488860 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 OR5H15A6NDH6 313 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 CXCR6O00574 342 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 SCDO00767 359 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 TP53I11O14683 189 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 GSC2O15499 205 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 RRP9O43818 475 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 SCO2O43819 266 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 ABCB7O75027 752 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 GMNNO75496 209 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PGM3O95394 542 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 OPN1SWP03999 348 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 ITGB2P05107 769 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 HSD17B1P14061 328 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 ME2P23368 584 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 HTR1EP28566 365 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 CD96P40200 585 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PNLIPRP2P54317 469 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 RPP38P78345 283 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 OR1C1Q15619 314 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 ZNF791Q3KP31 576 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 INTS11Q5TA45 600 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PRAMEF20Q5VT98 475 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 RTL4Q6ZR62 310 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 YTHDF3Q7Z739 585 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 GPALPP1Q8IXQ4 340 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 ULK2Q8IYT8 1036 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 FBXW8Q8N3Y1 598 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 GATSQ8NAP1 163 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 SNRNP27Q8WVK2 155 aaKnown RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 HGDQ93099 445 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 FAM162AQ96A26 154 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 SIGLEC12Q96PQ1 595 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 NODALQ96S42 347 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 TREX2Q9BQ50 279 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PCDHAC1Q9H158 963 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PRORYQ9H606 182 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 METTL7AQ9H8H3 244 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 POLE3Q9NRF9 147 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 KLRF1Q9NZS2 232 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
TRAIP-209ENST00000488860 A0A0G2JPF8 293 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 HNRNPCL2B2RXH8 293 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 HNRNPCL3B7ZW38 293 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 G3V3Y1 287 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 PDE9AO76083 593 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 STAMBPO95630 424 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
TRAIP-209ENST00000488860 FAM87AP0C7U9 286 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 HNRNPCL4P0DMR1 293 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 CCL3P10147 92 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 NAGAP17050 411 aa11.31□□□□□ -0.6
TRAIP-209ENST00000488860 GGT1P19440 569 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms