RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 STX12Q86Y82 276 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
HDLBP-241ENST00000487169 TEX13CA0A0J9YWL9 993 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 LRRN3E7EW58 273 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 H0YGG7 62 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 L7N2F9 121 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 RBBP9O75884 186 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 OR1D4P47884 311 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 ARF3P61204 181 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-241ENST00000487169 VAMP2P63027 116 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 CCNJQ5T5M9 372 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 PRAMEF8Q5VWM4 474 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 PRAMEF7Q5VXH5 474 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 OR5K2Q8NHB8 316 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 CCDC120Q96HB5 630 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 DUSP23Q9BVJ7 150 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 LRRN3Q9H3W5 708 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 MGAT4AQ9UM21 535 aa12.6□□□□□ -0.39
HDLBP-241ENST00000487169 TTC3P53804 2025 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 OR2T1O43869 369 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ALDOCP09972 364 aaKnown RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 FUT1P19526 365 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 SFXN2Q96NB2 322 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 FRMD6Q96NE9 622 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 SLC7A11Q9UPY5 501 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 BAIAP2Q9UQB8 552 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 RPH3AQ9Y2J0 694 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ST14Q9Y5Y6 855 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 AP1M2Q9Y6Q5 423 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 TNRC6CQ9HCJ0 1690 aaKnown RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 LAMB2P55268 1798 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 C13orf42A0A1B0GVH6 325 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 OR2AT4A6NND4 320 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 GFRA2O00451 464 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 CD8BP10966 210 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 HERV-K104P61576 105 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 SRYQ05066 204 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 POU4F2Q12837 409 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 APOFQ13790 326 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 MICAQ29983 383 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 DTX3Q8N9I9 347 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 SLC37A3Q8NCC5 494 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 OR8S1Q8NH09 359 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ZNF69Q9UC07 566 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 CSNK1G3Q9Y6M4 447 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 C12orf71A8MTZ7 269 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 FAM171A2A8MVW0 826 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 DENRO43583 198 aaKnown RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 TFAP2AP05549 437 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 GSTT2P0CG29 244 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 AHRP35869 848 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 FRKP42685 505 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 MAGEA3P43357 314 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ACTA2P62736 377 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ACTG2P63267 376 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 ERV3-1Q14264 604 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 GPR149Q86SP6 731 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 PPP1R3BQ86XI6 285 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 LILRA3Q8N6C8 439 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-241ENST00000487169 BORCS8Q96FH0 119 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 POU2F3Q9UKI9 436 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 SLC7A7Q9UM01 511 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
HDLBP-241ENST00000487169 FXYD6-FXYD2A0A087WZ82 144 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 ACOT7O00154 380 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.39
HDLBP-241ENST00000487169 CD97P48960 835 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 POU3F4P49335 361 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 MAZP56270 477 aaKnown RBP12.58□□□□□ -0.39
HDLBP-241ENST00000487169 E2F1Q01094 437 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 MAP4K2Q12851 820 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 MBTPS1Q14703 1052 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 ZNF611Q8N823 705 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 ANKK1Q8NFD2 765 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 TMEM239Q8WW34 195 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 FKBP10Q96AY3 582 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 URM1Q9BTM9 101 aaKnown RBP12.58□□□□□ -0.39
HDLBP-241ENST00000487169 FUNDC2Q9BWH2 189 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 THAP10Q9P2Z0 257 aaPredicted RBP12.58□□□□□ -0.39
HDLBP-241ENST00000487169 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.39
HDLBP-241ENST00000487169 TBX21Q9UL17 535 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 PCDHA9Q9Y5H5 950 aa12.58□□□□□ -0.39
HDLBP-241ENST00000487169 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 INMT-MINDY4F8WBC2 141 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 CASC3O15234 703 aaKnown RBP12.58□□□□□ -0.4
HDLBP-241ENST00000487169 PPP1R3DO95685 299 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.4
HDLBP-241ENST00000487169 PGFP49763 221 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 HSD11B2P80365 405 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 ZNF45Q02386 682 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 TRAM1Q15629 374 aa12.58□□□□□ -0.4
HDLBP-241ENST00000487169 SYPL1Q16563 259 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms