RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 GTF3C4Q9UKN8 822 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 DIDO1Q9BTC0 2240 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 hCG_38984A0A1B0GV85 526 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 FAM47DPA6NHR8 397 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC169A6NNP5 214 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 A8MVM7 634 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 K7ERI5 159 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 RNF103O00237 685 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 LAD1O00515 517 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 DKC1O60832 514 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 MTRF1O75570 445 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 TNFSF15O95150 251 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 SEMA4FO95754 770 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 RPLP0P05388 317 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 MELTFP08582 738 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 MBL2P11226 248 aaPredicted RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 C4BPBP20851 252 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 BDNFP23560 247 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 PKLRP30613 574 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 ATP4BP51164 291 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 METAP1P53582 386 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 CLDN17P56750 224 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 EIPR1Q53HC9 387 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 TTC27Q6P3X3 843 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 SLC39A4Q6P5W5 647 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 TRMT11Q7Z4G4 463 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC148Q8NFR7 591 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC12Q8WUD4 166 aaPredicted RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 PRCCQ92733 491 aaPredicted RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 MYLPFQ96A32 169 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC43Q96MW1 224 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 TCHPQ9BT92 498 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 NUP58Q9BVL2 599 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 UBQLN1Q9UMX0 589 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 PKDREJQ9NTG1 2253 aa3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 FBN1P35555 2871 aaKnown RBP3.56□□□□□ -1.84
SMARCC1-207ENST00000485833 JMJD1CQ15652 2540 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 VPS37CA5D8V6 355 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 ARHGEF35A5YM69 484 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 URADA6NGE7 173 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 NKX6-3A6NJ46 265 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 F8VP50 259 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 F8VVB4 439 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 F8VWA3 439 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 CCER2I3L3R5 266 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 CLDN5O00501 218 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 PHOX2AO14813 284 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 OGTO15294 1046 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 NEBLO76041 1014 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 IFNAR1P17181 557 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 CYP3A5P20815 502 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 LMO2P25791 158 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 DUTP33316 252 aaKnown RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 DUSP3P51452 185 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 MFAP3P55082 362 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 C21orf59P57076 290 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 RPS14P62263 151 aaKnown RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 ILKQ13418 452 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 KYNUQ16719 465 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 PRR30Q53SZ7 412 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 GUSBP11Q6P575 273 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 C11orf53Q8IXP5 236 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 OR9Q2Q8NGE9 314 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 C2orf15Q8WU43 125 aaKnown RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 SCFD1Q8WVM8 642 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 NSMAFQ92636 917 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 RBM41Q96IZ5 413 aaKnown RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 RMDN2Q96LZ7 410 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 IL12RB2Q99665 862 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 BBS2Q9BXC9 721 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 LHX5Q9H2C1 402 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 SNX25Q9H3E2 840 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 UXTQ9UBK9 157 aaPredicted RBP3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 COLEC10Q9Y6Z7 277 aa3.55□□□□□ -1.84
SMARCC1-207ENST00000485833 FN1P02751 2386 aaKnown RBP3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 UNC13CQ8NB66 2214 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 COL6A5A8TX70 2615 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 PP2D1A8MPX8 630 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 KLLNB2CW77 178 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 TLR4O00206 839 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 UBE2CO00762 179 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 SLC9A3R1O14745 358 aaPredicted RBP3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 PHF1O43189 567 aaPredicted RBP3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 TOM1L1O75674 476 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 LUC7L3O95232 432 aaKnown RBP3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 ACOT2P49753 483 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 NUMBP49757 651 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 SULT2A1Q06520 285 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 MZT1Q08AG7 82 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 CDKN3Q16667 212 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 POM121L1PQ3SYA9 428 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 FAM174BQ3ZCQ3 159 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 CFAP221Q4G0U5 840 aa3.54□□□□□ -1.84
SMARCC1-207ENST00000485833 ZNF542PQ5EBM4 170 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms