RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GXYLT2A0PJZ3 443 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 CPSF4LA6NMK7 179 aaKnown RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 KCNK2O95069 426 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 ATE1O95260 518 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 GNSP15586 552 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 POU1F1P28069 291 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 IFNGR2P38484 337 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 FUT7Q11130 342 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 SRSF5Q13243 272 aaKnown RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 SERTAD2Q14140 314 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 ERV3-1Q14264 604 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 KCNAB1Q14722 419 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 DECR1Q16698 335 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 TMEM201Q5SNT2 666 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 KANSL1Q7Z3B3 1105 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 KMT5CQ86Y97 462 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 TRUB1Q8WWH5 349 aaKnown RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 RORBQ92753 470 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 MYDGFQ969H8 173 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 DGAT2Q96PD7 388 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 PELOQ9BRX2 385 aaKnown RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 COPS4Q9BT78 406 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 GPN2Q9H9Y4 310 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 CUTCQ9NTM9 273 aa12.3□□□□□ -0.44
CPNE1-225ENST00000483495 HEMK1Q9Y5R4 338 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-225ENST00000483495 CDHR4A6H8M9 788 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 FMO6PO60774 539 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 CDC123O75794 336 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 OR2B3O76000 313 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SOX14O95416 240 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 THY1P04216 161 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 CDK1P06493 297 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 IGFBP1P08833 259 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 MAP2K4P45985 399 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 ZXDAP98168 799 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 HOXC5Q00444 222 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 ZNHIT3Q15649 155 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 UBE2UQ5VVX9 321 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PTCHD4Q6ZW05 846 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PLEKHM3Q6ZWE6 761 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 GDF7Q7Z4P5 450 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 ANKRD13BQ86YJ7 626 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 GNPDA2Q8TDQ7 276 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 ACOT11Q8WXI4 607 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 FUNDC2Q9BWH2 189 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 LANCL2Q9NS86 450 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 H3BN98 237 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 HRKO00198 91 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PEX12O00623 359 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PRAMEF2O60811 474 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PNLIPP16233 465 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 MAOAP21397 527 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 EPHA8P29322 1005 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SSTR4P31391 388 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 OMPP47874 163 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 DHPSP49366 369 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SEPHS1P49903 392 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 TSPAN31Q12999 210 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 TBCEQ15813 527 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 AMZ1Q400G9 498 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 MRPL2Q5T653 305 aaKnown RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 FIGNL1Q6PIW4 674 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 RANBP3LQ86VV4 465 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 METTL27Q8N6F8 245 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SLC41A3Q96GZ6 507 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 OR1F2PQ96R84 312 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 CNOT2Q9NZN8 540 aaKnown RBP12.29□□□□□ -0.44
CPNE1-225ENST00000483495 SUSD2Q9UGT4 822 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 ENPP5Q9UJA9 477 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 NTNG1Q9Y2I2 539 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 MMACHCQ9Y4U1 282 aa12.29□□□□□ -0.44
CPNE1-225ENST00000483495 TTC36A6NLP5 189 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 M0R129 80 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 KLF4O43474 513 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 HYAL3O43820 417 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-225ENST00000483495 FADS2O95864 444 aaKnown RBP12.28□□□□□ -0.44
CPNE1-225ENST00000483495 SLC15A1P46059 708 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 ARL4DP49703 201 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 CDK5Q00535 292 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 PLAURQ03405 335 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF267Q14586 743 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-225ENST00000483495 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF730Q6ZMV8 503 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms