RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 EHD1Q9H4M9 534 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 FKRPQ9H9S5 495 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 G6PC2Q9NQR9 355 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 PAQR5Q9NXK6 330 aaPredicted RBP10.37□□□□□ -0.75
USP11-208ENST00000480104 PRSS50Q9UI38 385 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 SOX13Q9UN79 622 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 TRAF6Q9Y4K3 522 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 SLC25A15Q9Y619 301 aa10.37□□□□□ -0.75
USP11-208ENST00000480104 SLC22A31A6NKX4 558 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 AKR1B10O60218 316 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 PRAMEF4O60810 478 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 WDR47O94967 919 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 IFNB1P01574 187 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 NR2F6P10588 404 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 ZNF17P17021 662 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 COX5AP20674 150 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 IGHV1-2P23083 117 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 FPR2P25090 351 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 GDF5P43026 501 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 NPY2RP49146 381 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 KHKP50053 298 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 RASGEF1BQ0VAM2 473 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 EXOSC7Q15024 291 aaKnown RBP10.36□□□□□ -0.75
USP11-208ENST00000480104 ZNHIT3Q15649 155 aaPredicted RBP10.36□□□□□ -0.75
USP11-208ENST00000480104 TMEM44Q2T9K0 475 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 C18orf21Q32NC0 220 aaPredicted RBP10.36□□□□□ -0.75
USP11-208ENST00000480104 ZNF628Q5EBL2 1059 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 PRAMEF9Q5VWM5 478 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 ASPHD2Q6ICH7 369 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 GTF2IRD2Q86UP8 949 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 ZNF786Q8N393 782 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 NANPQ8TBE9 248 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 FAM110BQ8TC76 370 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 TMIGD2Q96BF3 282 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 C1QTNF6Q9BXI9 259 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
USP11-208ENST00000480104 ANO10Q9NW15 660 aa10.36□□□□□ -0.75
USP11-208ENST00000480104 A0A1W2PR48 441 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 LYNX1G3V0Z9 82 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 TO15178 435 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 ADAMDEC1O15204 470 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 GYPCP04921 128 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 ENO2P09104 434 aaPredicted RBP10.35□□□□□ -0.75
USP11-208ENST00000480104 LYNX1P0DP58 116 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 GAAP10253 952 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 ETS1P14921 441 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 NT5EP21589 574 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 EDNRAP25101 427 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 CTNNA1P35221 906 aaKnown RBP10.35□□□□□ -0.75
USP11-208ENST00000480104 IDH3GP51553 393 aaPredicted RBP10.35□□□□□ -0.75
USP11-208ENST00000480104 CDKN2DP55273 166 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 COL10A1Q03692 680 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 DUSP2Q05923 314 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 ZP4Q12836 540 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 NR1I3Q14994 352 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 TMEM35AQ53FP2 167 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 C6orf163Q5TEZ5 329 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 HBMQ6B0K9 141 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 OR4C11Q6IEV9 310 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 DOK3Q7L591 496 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 SPATA19Q7Z5L4 167 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 TRIM58Q8NG06 486 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 DVL3Q92997 716 aaPredicted RBP10.35□□□□□ -0.75
USP11-208ENST00000480104 RAB1BQ9H0U4 201 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 ANKZF1Q9H8Y5 726 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 PRM3Q9NNZ6 103 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 TREM2Q9NZC2 230 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 BCAP29Q9UHQ4 241 aa10.35□□□□□ -0.75
USP11-208ENST00000480104 A0A0J9YW62 118 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 RAD51DO75771 328 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 HAUS5O94927 633 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 FSHBP01225 129 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 TFP02787 698 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 EVI2BP34910 448 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 SERPINF1P36955 418 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 OR3A2P47893 321 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 PPOXP50336 477 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 PGGT1BP53609 377 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 BAMBIQ13145 260 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 THOC5Q13769 683 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 EFR3AQ14156 821 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 RNPS1Q15287 305 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 ZNF239Q16600 458 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 STX1AQ16623 288 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 GLYR1Q49A26 553 aaPredicted RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 SH2D4BQ5SQS7 431 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 ANKRD22Q5VYY1 191 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 C11orf63Q6NUN7 778 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 LARP4Q71RC2 724 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP11-208ENST00000480104 WDR75Q8IWA0 830 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 KIR3DL3Q8N743 410 aa10.34□□□□□ -0.75
USP11-208ENST00000480104 ZNF473Q8WTR7 871 aaKnown RBP10.34□□□□□ -0.75
USP11-208ENST00000480104 SLC25A28Q96A46 364 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms