RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TCEA1P23193 301 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 PRPH2P23942 346 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 CRHR1P34998 444 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 RFX3P48380 749 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 GAS1P54826 345 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 LIPMQ5VYY2 423 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 TDRPQ86YL5 185 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 CDRT4Q8N9R6 151 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 OR2M3Q8NG83 312 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 OR4N2Q8NGD1 307 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 MZB1Q8WU39 189 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 UBLCP1Q8WVY7 318 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.324e-8■■■■■ 36.3
SMARCE1-209ENST00000478349 PPCDCQ96CD2 204 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 ELP4Q96EB1 424 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 C1GALT1C1Q96EU7 318 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM111AQ96PZ2 611 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 MED18Q9BUE0 208 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 G6PC3Q9BUM1 346 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 LIME1Q9H400 295 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 GLIPR2Q9H4G4 154 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 OXSMQ9NWU1 459 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 AKAP9Q99996 3911 aa13.06□□□□□ -0.32
SMARCE1-209ENST00000478349 EML6Q6ZMW3 1958 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 A0A087WZY1 265 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 NPIPB8E9PQR5 432 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 H3BML4 177 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 SEC14L5O43304 696 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 ARHGEF9O43307 516 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 FADS1O60427 444 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 TNFSF13O75888 250 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 HSPA4LO95757 839 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 HRGP04196 525 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 HPGDP15428 266 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF17P17021 662 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 LCN1P31025 176 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 RPL3P39023 403 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 CD79BP40259 229 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 ASMTP46597 345 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 KCNJ5P48544 419 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 FOXA1P55317 472 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 HSPB3Q12988 150 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 SGCBQ16585 318 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 LCE2DQ5TA82 110 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 RNF165Q6ZSG1 346 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 SZRD1Q7Z422 152 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 R3HCC1LQ7Z5L2 792 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF845Q96IR2 970 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 PINK1Q9BXM7 581 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 TXLNGYQ9BZA5 131 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 EMCNQ9ULC0 261 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 EMC9Q9Y3B6 208 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 TESMINQ9Y4I5 508 aa13.05□□□□□ -0.32
SMARCE1-209ENST00000478349 NINQ8N4C6 2090 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 SETD2Q9BYW2 2564 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 TMEM114B3SHH9 223 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 AZIN1O14977 448 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 EMC8O43402 210 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 TBX19O60806 448 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 UTS2O95399 124 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 ANGPTL1O95841 491 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 TGM6O95932 706 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 NGFRP08138 427 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 CD8BP10966 210 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 POU2F1P14859 743 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 ME2P23368 584 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 MAPK1P28482 360 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 GABRA3P34903 492 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 ZNF41P51814 821 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 B3GALT5-AS1P59052 145 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PRR5P85299 388 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 FOXD4Q12950 439 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 OR6Y1Q8NGX8 325 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 CAVIN3Q969G5 261 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 MTERF3Q96E29 417 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PGM2Q96G03 612 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PRRG4Q9BZD6 226 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 REEP4Q9H6H4 257 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PLEKHF2Q9H8W4 249 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 EML4Q9HC35 981 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 EQTNQ9NQ60 294 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 ACSS1Q9NUB1 689 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 MED11Q9P086 117 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 PROCRQ9UNN8 238 aa13.04□□□□□ -0.32
SMARCE1-209ENST00000478349 NCKAP5O14513 1909 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms