RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PRELID2Q8N945 189 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 SPATA4Q8NEY3 305 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 OR2T11Q8NH01 316 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 WFDC5Q8TCV5 224 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 FAM3CQ92520 227 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 DYRK2Q92630 601 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 ERP27Q96DN0 273 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 LINC00615Q96LM1 132 aaPredicted RBP3.43□□□□□ -1.86
UBR3-209ENST00000477461 OLFM3Q96PB7 478 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 TSGA13Q96PP4 275 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 PPP1R2P1Q96PQ5 205 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 VAT1Q99536 393 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 LGMNQ99538 433 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 PIGQQ9BRB3 760 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 FEM1AQ9BSK4 669 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 TMEM121Q9BTD3 319 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 SLC25A23Q9BV35 468 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 DDX47Q9H0S4 455 aaKnown RBP3.43□□□□□ -1.86
UBR3-209ENST00000477461 RAB17Q9H0T7 212 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 LRRC19Q9H756 370 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 NT5MQ9NPB1 228 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 TRPV5Q9NQA5 729 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 RBM22Q9NW64 420 aaKnown RBP eCLIP3.43□□□□□ -1.86
UBR3-209ENST00000477461 ELOVL2Q9NXB9 296 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 DAPK2Q9UIK4 370 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 DNPEPQ9ULA0 475 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 CLEC4EQ9ULY5 219 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 NDRG2Q9UN36 371 aaKnown RBP3.43□□□□□ -1.86
UBR3-209ENST00000477461 DUSP12Q9UNI6 340 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 PLA2G4CQ9UP65 541 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 NEU3Q9UQ49 428 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 ERVW-1Q9UQF0 538 aa3.43□□□□□ -1.86
UBR3-209ENST00000477461 UTP11Q9Y3A2 253 aaKnown RBP3.43□□□□□ -1.86
UBR3-209ENST00000477461 ANKRD36A6QL64 1941 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CXorf51AA0A1B0GTR3 108 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ANKRD61A6NGH8 418 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 MSGN1A6NI15 193 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 C2orf81A6NN90 581 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 RNF103O00237 685 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CLDN4O14493 209 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 TTI1O43156 1089 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 PSMD3O43242 534 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 SRSF10O75494 262 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 ANXA9O76027 345 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CLDN1O95832 211 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 GSRP00390 522 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 GPIP06744 558 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CISD3P0C7P0 127 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CPT2P23786 658 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 PTPN3P26045 913 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 PTGER4P35408 488 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 FDFT1P37268 417 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 TNFRSF4P43489 277 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 STK19P49842 368 aaPredicted RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 SERPINH1P50454 418 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 PPP5CP53041 499 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 RAD23AP54725 363 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 GEMP55040 296 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 BASP1P80723 227 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 SARNPP82979 210 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 ARF5P84085 180 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 RBPJQ06330 500 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 KLC1Q07866 573 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 SLC10A7Q0GE19 358 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CALCOCO2Q13137 446 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CUL3Q13618 768 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 TRIP13Q15645 432 aaPredicted RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 CTU2Q2VPK5 515 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 TEX44Q53QW1 395 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ANKRD20A2Q5SQ80 823 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 C6orf163Q5TEZ5 329 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ANKRD20A1Q5TYW2 823 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ANKRD20A3Q5VUR7 823 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 C22orf39Q6P5X5 142 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 PAQR6Q6TCH4 344 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 LEKR1Q6ZMV7 388 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 TRMT11Q7Z4G4 463 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 NDUFAF2Q8N183 169 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 MMGT1Q8N4V1 131 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ALLCQ8N6M5 410 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 THAP8Q8NA92 274 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 BBOF1Q8ND07 529 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 OR52K2Q8NGK3 314 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CCDC110Q8TBZ0 833 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 ROBO4Q8WZ75 1007 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 OR8D1Q8WZ84 308 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 GDAP1L1Q96MZ0 367 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 SPATA13Q96N96 652 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 CLEC7AQ9BXN2 247 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 POLR1EQ9GZS1 481 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 MFSD1Q9H3U5 465 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 C10orf88Q9H8K7 445 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 RRAGDQ9NQL2 400 aaPredicted RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 FAM120CQ9NX05 1096 aaKnown RBP3.42□□□□□ -1.86
UBR3-209ENST00000477461 C5AR2Q9P296 337 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 SUN2Q9UH99 717 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 PCYOX1Q9UHG3 505 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 RSPH14Q9UHP6 348 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 MUTYHQ9UIF7 546 aa3.42□□□□□ -1.86
UBR3-209ENST00000477461 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms